Limnobacter sp. SAORIC-580: HKT17_13870
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Entry
HKT17_13870 CDS
T06583
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
limn
Limnobacter sp. SAORIC-580
Pathway
limn00521
Streptomycin biosynthesis
limn00523
Polyketide sugar unit biosynthesis
limn00541
O-Antigen nucleotide sugar biosynthesis
limn01100
Metabolic pathways
limn01110
Biosynthesis of secondary metabolites
limn01250
Biosynthesis of nucleotide sugars
Module
limn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
limn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HKT17_13870 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HKT17_13870 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HKT17_13870 (rfbC)
Enzymes [BR:
limn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HKT17_13870 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
ZFYVE21_C
Motif
Other DBs
NCBI-ProteinID:
QJR30707
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Position
complement(2965245..2965796)
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AA seq
183 aa
AA seq
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MQCNPTPLQGLLLLTPTVYTDARGHFFESFNAKTFKQVAGIQPEFVQTNESLSKRGVLRG
LHWQTAPKAQGKLVRVVHGAVFDVAVDLRENSETFGQWYGCELSSTNHIQLWIPPGFAHG
FLTLTDTAITSYQVTEHHSPEHEHCMAWNDPVLNIDWPLKQAGVAKPTLSPKDEQGVAFT
SLS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcaatccaacccccctgcaaggtttgttgttacttacacccaccgtttacacc
gacgcacgcggtcacttttttgaaagcttcaatgcgaaaacgttcaagcaggtggcaggc
attcagcccgagtttgtacaaaccaatgaatcgctttcaaagcgcggggtgttgcgcggc
ctgcactggcaaactgcccccaaggcacagggcaaactggtacgtgtggtgcacggtgca
gtgtttgatgtggccgtggacctgcgcgaaaattcggaaacatttggccagtggtatggc
tgtgaattaagcagcaccaaccatattcagctgtggataccgcctggttttgcgcatggt
tttttaacgctgaccgacaccgcaattaccagttaccaggtgaccgagcaccacagcccc
gagcacgagcattgcatggcctggaacgacccggtgttgaacattgattggccattgaag
caggctggtgttgcaaagccaaccctgtcgcccaaggacgaacagggtgtggcttttaca
agcttgagttga
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