Lactobacillus intestinalis: KBW87_06990
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Entry
KBW87_06990 CDS
T08339
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq00521
Streptomycin biosynthesis
liq00523
Polyketide sugar unit biosynthesis
liq00541
O-Antigen nucleotide sugar biosynthesis
liq01100
Metabolic pathways
liq01110
Biosynthesis of secondary metabolites
liq01250
Biosynthesis of nucleotide sugars
Module
liq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KBW87_06990 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KBW87_06990 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KBW87_06990 (rfbC)
Enzymes [BR:
liq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KBW87_06990 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTW40123
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All DBs
Position
complement(1464237..1464845)
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AA seq
202 aa
AA seq
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MGQIKVEKNVGGIEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQSSSTKG
VLRGLHFQKHYPQVKLVRAVRGSVFDVAVDLRSNSKTYGKWYGVELTAENKKQFLIPQGF
AHGFLVLSDEAEFCYKVNDFWHPNDEGGMAWNDPEIGIEWPHLQGNYPENASAEGYTLDD
GTKLTLSDRDQEWVGLKDTFKF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaattaaagttgaaaagaatgttggcggcattgaaggtttagcagttattacc
ccaactgttcatggtgatgatcgtggttacttcatggaaacttttaaccaaagagacatg
atggatgcaggttttagcattaacttcgttcaagataaccaatcaagttcaactaaaggt
gtacttcgtggtttacatttccaaaagcattatccacaagttaagttggttcgtgccgtt
cgcggtagcgtatttgatgttgctgttgaccttagaagtaattcaaagacttacggtaag
tggtatggtgttgaattaactgctgaaaacaagaagcaattcttgatcccacaaggtttt
gctcatggtttccttgttttgagtgacgaagcagaattctgctacaaggttaacgatttc
tggcacccaaacgatgaaggtggtatggcttggaacgatcccgaaattggaattgaatgg
ccacatcttcaaggtaattacccagaaaatgccagtgctgaaggctacactttagatgat
ggaacaaaattgactttgtctgatcgtgaccaagaatgggttggtttgaaagacactttc
aagttttaa
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