Listeria ivanovii WSLC3009: AX25_01530
Help
Entry
AX25_01530 CDS
T03045
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
liw
Listeria ivanovii WSLC3009
Pathway
liw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
liw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AX25_01530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liw03021
]
AX25_01530
03400 DNA repair and recombination proteins [BR:
liw03400
]
AX25_01530
Enzymes [BR:
liw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AX25_01530
Transcription machinery [BR:
liw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AX25_01530
DNA repair and recombination proteins [BR:
liw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AX25_01530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHI54849
LinkDB
All DBs
Position
325107..328661
Genome browser
AA seq
1184 aa
AA seq
DB search
MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIED
FAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAK
DVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIY
ERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDP
ETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDEEK
EINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGE
LTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNK
FGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDDEGTFTEEEVMARFRSE
NLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVG
TGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSN
QGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDN
DLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLG
MDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaggacattcaggacatgatgtaaaatatggacggcatcgtacgcgtagaagtttt
gcgcgaatcagtgaagtacttgaattaccaaacttaattgagattcaaacagcttcttac
caatggttcttagatgaagggctacgtgagatgttccgcgatatttcgccaattgaggat
tttgcgggtaatttatctttagaattcattgattacgatcttggagagccgaaatactcg
gtagaagaatctaagaaccgtgatgcaaactatgcggctccactacgcgtgaagttgcgc
ctaatcaacaaagaaaccggcgaagtaaaagaccaagaagtatttatgggagatttcccg
ttaatgactgaaatgggtacgttcattattaatggggcagaacgtgttatcgtttcccaa
ttagttcgttctccaggtgtctacttcaacggaaaactcgacaaaaatggtaaaaaaggc
tttggttctacagtcatccctaaccgtggggcttggcttgagtacgaaacagatgctaaa
gacgttgtacacgttcgtattgaccgtacacgtaaattaccagtaacggttttacttcgt
gcactaggctttggttccgatcaagaaattattgatttaatcggggacaatgactacttg
cgcaacacgcttgaaaaagacaacactgacaatgctgaaaaagcacttctagaaatttac
gaaagattacgtccgggtgaacccccaacagttgataatgctagaagcttactggtttct
cgtttctttgatccaaaacgctatgatcttgcaagcgttggacgttataaaatcaacaaa
aaattacatctaaaaaaccgtctattcaatcaaacattagcagaaactttagtggatcca
gaaactggtgaaattatcgcttctaaaggtgacattttggatcgtcgtaatttagatcaa
attattcctaatttagaaaacggtgtaggtttccgtacacttcgtccaactgatggagtt
atggaagatagcgtactcgttcaatctattaaaatctacgcaccaaatgatgaagaaaaa
gaaatcaacatcattggtaatgcgtatattgaagaaaacgtaaaacacatcacgccttct
gatattatttcatccattagctacttctttaacttgctacatggtgttggcgatacagat
gacatcgatcacctaggtaatcgtcgtcttcgttctgttggtgaacttttacaaaaccaa
ttccgtatcggtttatcccgtatggaacgtgtggttcgtgaacgtatgtctattcaagat
atgactacaattactccacaacaattgattaatattcgcccagtagttgcatccattaaa
gagttctttggtagctcgcagttatctcagtttatggatcaaacaaatccacttggcgaa
cttacgcataaacgtcgtctttcagcgcttggacctggtggtttgacgcgtgaacgtgct
ggttatgaagtacgtgacgtgcattactctcactatggccgtatgtgtccgattgaaacg
ccagagggaccaaacattggtttaattaactccctttcttcctttgcaaaagtaaataaa
ttcggctttattgaaacgccttaccgccgcgtagatcctgaaacaaaccgtgttacagat
aagattgactatctaactgcggatgaagaggataattacgtagtagcgcaagcgaactcg
aaattagacgatgaaggtactttcacagaagaagaagttatggctcgtttccgttcagaa
aacttagcggtagaaaaagaacgtattgattacatggatgtatcgcctaaacaggttgta
tctgttgcgacagcatgtatcccattccttgaaaacgatgatagtaaccgtgcgctaatg
ggagcgaacatgcagcgtcaagcagttcctcttatgcaccctgaagctccatttgttgga
acaggtatggaacacgtatctgcaaaagactctggtgctgctgtaactgccaaacatgac
ggtattgtagaacacgttgaagctcgtgaaatctgggttcgtcgtgtatctctagtggat
ggcaaagaagtaactggcggaattgataaatatactttacgtaaatttgttcgttctaac
caaggtacttgttataaccaacgtccaaacgtagctgaaggagaccgcgttgttaaagga
gaaatccttggtaatggtccttcaatggattccggtgaacttgctctaggtcgtaacgta
cttgttgcattcatgacttgggacggttataactacgaggatgcaatcatcatgagtgaa
cgtcttgtaaaagatgacgtttatacttcgattcatattgaagaatttgaatcagaagct
cgtgatacaaaactcggacctgaagaaatgactcgtgatattccaaacgttggggaagat
gctttacgcgaccttgacgaacgtggaattatccgtgtcggagcagaagtaaaagataac
gaccttctagttggtaaagtaacaccaaaaggagttaccgaactaactgctgaagaacgt
ttactacatgctatctttggtgaaaaagcgcgtgaagttcgtgatacttccttacgtgta
cctcacggcggcggcggaatcgtgcttgacgtgaagatctttacacgtgaagcaggagac
gaattgccacctggtgtaaaccaattagtacgtgtttatattgtacaaaaacgtaaaatt
cacgaaggcgataaaatggctggacgtcatggtaataaaggggttatctcccgtatttta
cctgaagaagatatgccatttatgccagacggaacacctgttgacatcatgcttaaccca
ctaggggtaccatctcgtatgaatatcggacaagttcttgaattacacttaggtatggct
gctcgtgctttaggaattcatgttgcaactccagtatttgatggagcgaatgaagaagac
gtttggagcacagtggaagaagctggtatggcccgcgatgcgaaaacaattctttatgac
ggacgttctggtgaagcatttgataaccgtatctctgtaggtgtaatgtacatgatcaaa
cttgcccacatggttgatgataaacttcatgcgcgttcaactggaccttactctctagta
acgcaacaaccgcttggtggtaaagcgcaatttggtggacaacgttttggtgaaatggaa
gtatgggcactggaagcttatggtgctgcttatacacttcaagaaatcctaacgattaaa
tccgatgacgtggttggtcgtgtgaaaacttacgaagcgattgttaaaggcgaaagcgtt
ccagaacctggtgtgccagaatccttcaaagtactcatcaaagagcttcaaagtcttgga
atggacgttaaaatgctttccgcagacgaagaagagatcgagatgcgtgacatggatgat
gacgactttactaatcaaaatgatgccttcaatatcgtacaaccggaaaacgcagccgct
gaaaagactgagtaa
DBGET
integrated database retrieval system
