Lichenihabitans sp. PAMC28606: LGH83_12605
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Entry
LGH83_12605 CDS
T07621
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00521
Streptomycin biosynthesis
liz00523
Polyketide sugar unit biosynthesis
liz00541
O-Antigen nucleotide sugar biosynthesis
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
liz01250
Biosynthesis of nucleotide sugars
Module
liz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LGH83_12605 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGH83_12605 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LGH83_12605 (rfbC)
Enzymes [BR:
liz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LGH83_12605 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UDL93426
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All DBs
Position
complement(2666683..2667264)
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AA seq
193 aa
AA seq
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MIVEKLDIPDVVRIRPRRFGDPRGYFSETFSARMFREQVAALDFVQDNEALSGAVGTLRG
LHFQRPPTAQGKLIRAIRGAIFDVAVDIRQGSPTFGRHVWARLDGVDGDQLWVPPGFAHG
YCTLEPDTLVAYKVTNPYSPADDGGILWNDPALGIAWPLGAGGAVLSDKDTKLPVLADLP
AVFTYEANSMSTR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgagaaacttgatattcctgatgtggttcggattcgcccgcgtcgctttggc
gacccccgtggctatttctccgagaccttcagtgcccggatgttccgggagcaggttgcg
gctctcgatttcgtgcaggacaacgaggccctgtccggagcggttgggacgttgcgtggc
ctgcacttccaacggcctccgaccgcgcaaggcaagctgatccgcgccataagaggcgcg
atcttcgacgttgcggttgatatccggcaggggtcgccgacattcggccgccatgtctgg
gcgcgtctcgacggcgtcgatggcgatcaactctgggtgccgcccggttttgcccatggc
tattgcacgctcgagccggacacgttggtggcctataaggtaaccaacccctacagcccc
gccgacgatggcggcatcctgtggaacgacccggccctcggcatcgcgtggccgctcggc
gccggcggcgccgtcctgtccgacaaggacaccaagctgcccgttctcgccgacctgccc
gccgtcttcacctatgaggccaactcaatgagcacccgatga
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