Lichenihabitans sp. PAMC28606: LGH83_14530
Help
Entry
LGH83_14530 CDS
T07621
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
liz03000
]
LGH83_14530
Transcription factors [BR:
liz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LGH83_14530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
Sigma70_r4
Amidohydro_2
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UDL96710
LinkDB
All DBs
Position
3079655..3080692
Genome browser
AA seq
345 aa
AA seq
DB search
MGPTGPKRRFAAGKSTTVTLADVARLANVSEITVSRILRNIGPVADATRDRVLAAVADLG
YVPNRVAGTLASATSNLIGVIIPSLSNIVFADVLRGIDAGLEPSGFRPVVGITNYAAVAE
EKLVGSLLAWKPAAMILVGFDHTPITRRRLQQSGIRVAELMDIDSEPIDLAVGLSHRAAG
YESIRYLVGRGYRRFGYVGHDWDTDRRARLRWDGMVEALAEAGLTFEAEALFEGPSSTQA
GRTMLAGLLRKPHDLDVVMFSNDDMAVGGVFHCMAEGISPKRDLALFGFNGLDIGQALPT
PLSTIRSNRFLIGKTAVDRILSQPDRDGATAVIDTGFEILTGETA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggggcccaccgggccgaagaggcgtttcgccgcaggcaagtccaccaccgtcaccctg
gccgatgtggcccggctcgcgaacgtgagcgaaatcacggtgtcgcgcatcctgcggaat
atcggacccgtggccgatgcgacccgtgaccgcgtgctggcggcggtcgccgacctcggt
tacgtcccgaaccgggtggccggcactctcgcatcggcgacctcgaatctcatcggcgtc
atcatcccgtccttgtccaacatcgtcttcgccgacgtgttgcgcggcatcgatgccggg
ctggagccatcgggtttccggcccgtcgtcggcattaccaactacgcggccgtcgcggag
gaaaagctggtcgggtcgctgctggcttggaagcccgccgccatgatcctggtcggcttc
gaccacacgccgatcacccggcgccgcttgcaacaaagcggcattcgcgtggccgaactc
atggatattgattctgagccgatcgatctcgcggtcggcctgtcgcatcgcgccgccggc
tacgagagcatccgctatcttgttggtcgtgggtatcggcggttcggctatgtcggtcat
gactgggacaccgaccgtcgtgctcgcctgcgctgggacggcatggtggaggcgctggcc
gaggcgggtctgaccttcgaggccgaagccttgttcgaggggccgagttcgacccaggct
ggacgcacgatgttggctgggctgcttcgcaaaccgcatgatctcgacgtcgtcatgttc
tcgaacgacgatatggcggtcggcggtgtgttccactgcatggccgagggcatctcgccg
aaacgcgatctggcgctcttcggtttcaacggtctcgatatcgggcaggctctcccgacc
ccgctgtcgacgatccgctccaaccggttcctgatcggcaagacagcggtcgaccggatc
ctctcgcaaccagaccgcgatggcgcgacggccgtcatcgatacagggttcgagatccta
acgggcgagaccgcttag
DBGET
integrated database retrieval system
