Lotus japonicus: Lj0g3v0050449.1
Help
Entry
Lj0g3v0050449.1 CDS
T04348
Symbol
Lj0g3v0050449.1
Name
(Kazusa) -
KO
K14300
nuclear pore complex protein Nup133
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Lj0g3v0050449.1 (Lj0g3v0050449.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj0g3v0050449.1 (Lj0g3v0050449.1)
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj0g3v0050449.1 (Lj0g3v0050449.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Lj0g3v0050449.1 (Lj0g3v0050449.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Lj0g3v0050449.1 (Lj0g3v0050449.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
LinkDB
All DBs
AA seq
1309 aa
AA seq
DB search
MFSCGTKKNNGASRDQARASSVLDSPVTPPLRSSAVPNRPPTGTPAPWTPRLSVLARVPQ
VNRTGKEDNTDPIKPVFVAEFPQVVRDEQAALLHKRVPVEGCASGGIDKSTSLAWIISGN
RVFIWSYLSPASSMKCVVLEIPFNDGDVGKHEAGSWLLCVVNYDGASSGANKVAKHCNSA
AVVLCNRKTRAVVYWPDIYSQSRNAPVTNLVSSDEFVTSLVSDGKTFSNWLRRPSSLNEL
HMFNSMIASAVPGCDFVCVAFACSSSGKLWQFKCSPSGIHRTEVCESSMHLPPEGGDSGQ
LEGNKGYPRSLTWCFPHHSTKESNRQFLVLTDHEIKCFGVEFSSDIHVSMLWSQVIVGTD
PELGIKKDLAGQKGIWPLDVQVDDYGKVITILFATFCKDRISSSSYMQYSLLTMQYKSGL
DVGTTNDKILEKKAPIEVIIPKARVEAEDFLFSMRLRIGGKPSGSTVIISGDGTATVSHY
YRNATRLYQFDLPYDAGKVLDASILPSADDHAEGAWVVLTEKAGMWAIPEKAVILGGVEP
PERSLSRKGSSNERSAQEEIRNLTFAGNFAPRRASSEAWGTGDRQRAVLSGIARRTAQDE
ESEALLNQLFNEFLSSGQVDRSLEKLETSGSFERDGEINVFVRMSKSIIDTLAKHWTTTR
GAEILAMAYVSTQLLEKQQKHQKFLHFLALSKCHEELCSRQRHALQLILEHGEKLSAMIQ
LRELQNLISQNRSTGVGSSNSSLDIQLAGALWDMIQLVGDRARRNTVLLMDRDNAEVFYS
KVSDLENFFYCLDAELEYVIRPEHPSGIQIQRTCELSNACVTIIRTCFDYKNENQLWYPP
PEGLTPWYCQPAVRKGIWSVASVLLQLLNETSGLDKTAKLNLYNHLEAVAEVLLEAYSGA
VTAKIEREEEHKGLLDEYWKRRDALLETLHQQIKEFEATHKDSIEGAEEQNDEAIMKLTS
RLLSIAKQHGCYKVMWTVCCDVNDSELLRNIMRESLGPDGGFSYYVFEKLHENRQFSELL
KLGEEFPEELSIFLKEHPNLLWLHDLFLHQFSSASETLHALALTQNIQSTTAAEEEQAYM
KSKLKLSDRKNLLYLSKIAAFAAGRDAGTQVKVDRIEADLKILKLQEEVMKRLPSVEDKQ
LVEDQLLHPEDLIKLCLEGEDGELSLWTFDVFAWTSSSFRKTHRKLLEDCWKKASSQDDW
SKFHDSCMVEGWSDEETLQNLKNTVLFQASSRCYGPRSESFEEGFDQVLPLRQENMETSM
LGDMSSSVETILMQHKDFPVAGKLMLMAVMLGSDHDGDIGVEEGPSPME
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtgtggaacgaagaagaacaatggtgcttcgagggaccaagctcgtgcttcc
tcggtgctcgattctccggtcactcctcctctccgatcctccgccgtccctaaccgccca
cccaccggcacccccgctccctggactcctcgcttatctgtccttgccagggttcctcag
gtcaacagaactggaaaagaggacaacacagatccaattaaacctgtttttgttgccgag
tttccccaagttgttcgcgatgagcaagccgccttgctgcacaaacgcgttcccgttgaa
ggctgcgcgtctggtgggattgacaagagcacgtcccttgcttggattatttctggaaac
agggttttcatttggagttacttgtcacctgcgtcctccatgaaatgtgttgttcttgag
attccttttaatgatggggatgttggcaaacatgaggctggtagttggttgctctgtgtt
gttaattatgatggcgcctcttcaggggcgaataaagttgcaaaacattgcaactccgca
gctgttgttttgtgtaatcgaaagacacgggctgttgtgtactggcctgacatctattct
caatcacgcaatgctccagtcactaatcttgtgtcttctgatgagtttgtgactagtttg
gtttctgatgggaaaacattctccaactggctgcggcgaccgagtagtttgaatgaattg
cacatgtttaactctatgattgcttctgcagttcctggatgtgactttgtatgtgtggcc
tttgcttgtagctcaagtggtaaactctggcagtttaaatgcagtccttctggcattcat
cgaacagaagtgtgtgaaagtagtatgcatttgcctcctgaagggggtgattcgggtcag
ctcgagggcaacaaagggtacccaaggtcgctgacgtggtgttttccccatcattccaca
aaggaatcaaatcgccaatttttggttttgacagatcatgagataaagtgttttggagtt
gagttcagttctgatatacatgtttcaatgctttggtctcaggtaattgttggaacagat
cctgagttaggcattaagaaggatctggctggtcaaaagggaatttggcctcttgatgtg
caggtagatgattatggtaaagtgattaccattctttttgcaactttttgtaaggatcgg
attagcagttcaagctacatgcagtattctcttctgaccatgcaatataaatcaggattg
gatgtgggaactacaaatgacaagattttggagaaaaaagctcctattgaggtgattatc
ccaaaagctagagttgaagctgaagatttcttgttttccatgcggcttcgaatagggggc
aagccgtcaggatctacagtcataatatctggggatggaacagccactgtctcccattat
tatagaaatgctacacgactctatcaatttgatttaccctatgacgctggaaaagtacta
gatgcttcaattcttccatctgcagatgatcatgcagaaggtgcatgggttgtattaaca
gagaaagcaggaatgtgggcaataccagagaaggctgtcatacttggaggggttgaacca
cctgagcggagcttatcacgcaaaggcagctcaaacgaaagatctgcacaagaagagata
agaaatcttacatttgcaggcaactttgctcctagaagggctagctctgaagcatgggga
actggagatagacaaagggcggttttgagtgggattgcacgtcggactgcacaagatgaa
gaatcagaagctttattgaatcagctttttaatgaatttttatcctctggacaagttgac
aggtctcttgaaaagctagaaacttctggttcatttgaaagggatggagaaattaatgtt
tttgtgaggatgagcaaatcaatcattgataccttagctaagcattggacaacaaccaga
ggtgcagagattttggccatggcttatgtttccacccaactcttggaaaagcagcagaag
catcaaaagttcctgcactttcttgccttatccaaatgccatgaggagctgtgttctagg
cagagacatgccttgcaacttatcttggagcatggtgaaaagttatctgcaatgattcag
ctgagggaactgcaaaatctgattagccagaaccgatccacaggtgttggctcctcgaat
tctagtttagatattcagttggcaggtgctctttgggacatgatacaattagttggtgat
agagctcgccggaatactgtccttctgatggatagagataatgctgaagtgttctacagt
aaggtttcagatcttgaaaatttcttttactgcttagatgcagagttagagtatgttata
agaccagagcacccatctgggatccagatccagagaacatgtgaactctcaaatgcttgt
gttactataattaggacatgctttgactataagaatgagaaccaattatggtatccacct
cctgaaggtttaacaccttggtattgtcaacctgctgtgcgtaaggggatttggagtgtt
gcttctgtcctgcttcagttgttgaatgaaacatctgggcttgataaaacagcaaaatta
aatttgtacaatcatctagaagctgtagccgaagttctccttgaggcatattctggtgct
gttactgctaaaattgagcgtgaagaagaacacaaaggtctactggatgaatattggaag
aggcgagatgctcttcttgaaactctccatcaacaaattaaagaatttgaagctactcat
aaggattcaattgaaggagctgaagagcagaatgatgaagccattatgaagcttacttca
cgtctgttatcaattgctaaacaacatggatgctacaaagttatgtggacagtttgttgt
gatgtaaatgactcggaattactgagaaatattatgcgtgaaagtttgggacctgatggg
ggattcagttactatgtctttgagaaacttcatgagaacagacaattctctgagcttttg
aagctaggggaagagtttccagaagagttgtccattttcctgaaagagcatccaaatctt
ctttggcttcatgatttgttccttcatcaattttcttccgcttcggaaacacttcatgct
ttggctctcacacaaaacatacagtctaccacagctgcagaagaagaacaggcgtatatg
aagtcaaaactaaaattgtctgacagaaagaatcttttatatctctctaagatagctgca
tttgcagctggtagagatgctggaactcaggtgaaggtggaccgcattgaggctgattta
aagattctgaaattgcaggaagaagtaatgaagcgtcttccttctgttgaagataagcaa
cttgttgaagatcagctgcttcatccagaagacttgattaaactgtgcctagagggtgaa
gatggagagctctcattgtggaccttcgacgtgtttgcatggaccagttcctcgtttcgc
aagacccacagaaaacttttggaggattgctggaagaaggcttccagtcaggatgattgg
agcaagttccatgattcatgcatggttgaaggatggagtgacgaggaaaccctacaaaac
ctgaagaacactgtacttttccaagcttcaagcaggtgctatggaccccgaagtgaaagc
tttgaagaaggttttgatcaagtattacccttgagacaagagaacatggagacttctatg
ttgggggatatgagttcttcagttgaaacaatactgatgcagcacaaggattttccagtt
gcaggcaagcttatgctaatggcagtcatgttaggtagtgatcatgatggtgatatcgga
gtcgaagaagggccttctcccatggaatag
DBGET
integrated database retrieval system