Lotus japonicus: Lj1g3v4696550.1
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Entry
Lj1g3v4696550.1 CDS
T04348
Symbol
Lj1g3v4696550.1
Name
(Kazusa) -
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Lj1g3v4696550.1 (Lj1g3v4696550.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj1g3v4696550.1 (Lj1g3v4696550.1)
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj1g3v4696550.1 (Lj1g3v4696550.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Lj1g3v4696550.1 (Lj1g3v4696550.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Lj1g3v4696550.1 (Lj1g3v4696550.1)
BRITE hierarchy
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GFIT
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All DBs
AA seq
792 aa
AA seq
DB search
MRRLFRTWNEVFPLQTLLIIEKELGFTRSIHVNPEYFERQHLQQSSTTKGGVNDMAGALY
SNEESERPDRALAARRPWRDPRVNMHNNQLVHRDAFNDSDPERSIGGSFGGNEYSSGISS
KSGSGVGRNENRLIGGVAETLSSQRNGFSLKHSLSNHEAPKSMNKDAHHQSTQAITDLRS
NVMSGNWKDSEEEEFMWDEMNSGLTDKGRNVSSNLRADPWMADDENLKGEDHLFTSKSHP
FGEKVDREISTGKKQLPAFGGQSSLSWQLQKPHSRDKLNLKPGHSEGSVSTLGGLPGNIN
SSAVKMRNRSFMPNATTGVAKSMGHPQFDSGGAESPSGQSPLRTQSPSLSVSTHLPHSVR
NLAEQDYPPIPKTSQFLGSQYNPSPALPHNVKVGNLRKSQDQDMHGPLSSVTPRTDVTLK
TKKAPQSKVSLASETSAKSTTNSLSAASVKTGIIPNKSTASSLPATSCLDGRSLPSQSVV
RPARSGGPSPTTSIPQRKAGQPQRGSTQPVSSNVNNASVLSSNTTNKNALNPIENLLNSL
VAKGLISAKTKSATIVPSDLLVRSEDQTENIATSSSLLVPSVTSSAVVPELSSRDDVDDA
AKASQSTSVEVKDLIGFDFKPDVIREMHPHVIRELLDDLPHHCRICGVRLKQQEQFNRHL
EWHATREKEQNGLILASRRWYANSNDWIACKSEYQSENESTDSVDVHDKKTDGSQWDTMV
LADENQCLCVFCGELFEDVYCQEKDQWMFKGGVYLNNSDSKLEMKSRNVGPIVHARCLSE
NPMSNITNTEHD
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtctttttagaacttggaatgaagtctttcctcttcagacccttctgataatt
gagaaggaacttggcttcactcgtagcatccatgtgaatcccgagtatttcgaaaggcag
catctacagcaatccagcacgactaaaggaggagttaatgatatggctggagctctttac
tcaaatgaggagtcagagaggccagatagagctttagctgccagacggccatggcgggat
cctagggttaatatgcataataatcagctagtgcatagagatgcatttaatgactctgat
cctgaaaggagtattggtggatcctttggaggcaatgaatatagttcaggtatttcaagt
aagtcaggctcaggggtcggaagaaatgaaaataggctcattggtggtgttgcagagaca
ttatctagtcaaagaaatggattcagtctaaagcatagtttatcgaatcatgaagcaccg
aagtccatgaacaaagatgcacatcatcagtcaacacaagcgataactgacttacgtagc
aatgtgatgtctggtaactggaaagattctgaggaagaggagttcatgtgggatgagatg
aactctggtttgactgataaaggacgcaatgtctctagcaacttgagggcagacccctgg
atggctgatgatgaaaatctgaaaggtgaagatcacctattcacatccaaatcacaccct
tttggggaaaaggttgatagagaaatatctactggtaagaaacaactacctgcatttggg
ggccagtcatcattatcatggcaattgcagaagccgcactcaagggataagttgaatctg
aagccaggtcactctgaaggatctgtttccacccttggtggcttacctggaaatataaat
tcgtcagctgtaaagatgaggaatcggtcttttatgccgaatgcaacgacaggagtggcc
aaaagtatgggacatccgcaatttgattctgggggagctgaatctccttccggacagtca
cctttgagaacccagtctccatcactgtctgtaagcacacacctccctcattcagtgcga
aatttggctgagcaagattatcctccgattcctaaaacatctcaatttttgggaagccaa
tataatccctcccctgcccttcctcacaatgttaaggttggtaacttgcgaaaatcacag
gaccaggacatgcatggtccactatcttctgtaactcctcgcactgatgttactcttaaa
actaagaaggcaccccaatctaaagtttctttagccagtgaaacgtcagcgaagtcaacc
acaaatagtctttcagctgcatctgtgaagactggaatcatccccaacaaatcaactgcc
agtagtcttcctgctacaagttgtctggatggaaggagtcttccatctcaatcagtggtt
cggcctgctaggtcaggtggtccttcccctaccacatcaatacctcaaagaaaggctggt
caaccacaaaggggttctactcaaccagtttcctctaatgtgaacaatgcctcagttttg
agctcaaataccaccaataagaatgccttgaatccaattgaaaaccttttaaactcatta
gtcgcaaaaggtttgatatcagcaaaaacaaagtcagcaactatagtaccaagtgacctg
ttggtgcgatcagaggaccaaactgaaaacattgccaccagtagttctttgctagttcct
tcagttacaagttctgcagttgtcccggaactatcttccagagatgatgtagatgatgct
gcaaaagcatctcaatcaactagcgtagaagttaaagatcttattggctttgattttaaa
cctgatgtaattcgagaaatgcatccacatgtgatcagggaattattggatgatctcccg
catcattgcagaatttgtggtgttaggcttaaacagcaagaacagtttaatagacatttg
gagtggcatgccacaagagagaaagaacaaaatggtctaattttggcatcaagaagatgg
tatgcaaactcaaatgactggattgcttgcaagtctgaatatcaatcagagaatgagtct
actgattctgtagatgtacatgacaaaaagaccgacggtagtcaatgggatactatggtt
ctagcagatgaaaaccagtgcttgtgcgtattttgtggcgagctatttgaagatgtgtac
tgtcaggaaaaggaccagtggatgttcaaagggggtgtttacctgaacaattcagatagc
aaacttgagatgaaaagtagaaacgtaggccccattgttcacgcaagatgtttatcagag
aacccaatgtccaatatcaccaatacagagcatgattaatgc
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