KEGG   Lotus japonicus: Lj1g3v4696550.1
Entry
Lj1g3v4696550.1   CDS       T04348                                 
Symbol
Lj1g3v4696550.1
Name
(Kazusa) -
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Lj1g3v4696550.1 (Lj1g3v4696550.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj1g3v4696550.1 (Lj1g3v4696550.1)
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj1g3v4696550.1 (Lj1g3v4696550.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Lj1g3v4696550.1 (Lj1g3v4696550.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     Lj1g3v4696550.1 (Lj1g3v4696550.1)
SSDB
LinkDB
AA seq 792 aa
MRRLFRTWNEVFPLQTLLIIEKELGFTRSIHVNPEYFERQHLQQSSTTKGGVNDMAGALY
SNEESERPDRALAARRPWRDPRVNMHNNQLVHRDAFNDSDPERSIGGSFGGNEYSSGISS
KSGSGVGRNENRLIGGVAETLSSQRNGFSLKHSLSNHEAPKSMNKDAHHQSTQAITDLRS
NVMSGNWKDSEEEEFMWDEMNSGLTDKGRNVSSNLRADPWMADDENLKGEDHLFTSKSHP
FGEKVDREISTGKKQLPAFGGQSSLSWQLQKPHSRDKLNLKPGHSEGSVSTLGGLPGNIN
SSAVKMRNRSFMPNATTGVAKSMGHPQFDSGGAESPSGQSPLRTQSPSLSVSTHLPHSVR
NLAEQDYPPIPKTSQFLGSQYNPSPALPHNVKVGNLRKSQDQDMHGPLSSVTPRTDVTLK
TKKAPQSKVSLASETSAKSTTNSLSAASVKTGIIPNKSTASSLPATSCLDGRSLPSQSVV
RPARSGGPSPTTSIPQRKAGQPQRGSTQPVSSNVNNASVLSSNTTNKNALNPIENLLNSL
VAKGLISAKTKSATIVPSDLLVRSEDQTENIATSSSLLVPSVTSSAVVPELSSRDDVDDA
AKASQSTSVEVKDLIGFDFKPDVIREMHPHVIRELLDDLPHHCRICGVRLKQQEQFNRHL
EWHATREKEQNGLILASRRWYANSNDWIACKSEYQSENESTDSVDVHDKKTDGSQWDTMV
LADENQCLCVFCGELFEDVYCQEKDQWMFKGGVYLNNSDSKLEMKSRNVGPIVHARCLSE
NPMSNITNTEHD
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgagacgtctttttagaacttggaatgaagtctttcctcttcagacccttctgataatt
gagaaggaacttggcttcactcgtagcatccatgtgaatcccgagtatttcgaaaggcag
catctacagcaatccagcacgactaaaggaggagttaatgatatggctggagctctttac
tcaaatgaggagtcagagaggccagatagagctttagctgccagacggccatggcgggat
cctagggttaatatgcataataatcagctagtgcatagagatgcatttaatgactctgat
cctgaaaggagtattggtggatcctttggaggcaatgaatatagttcaggtatttcaagt
aagtcaggctcaggggtcggaagaaatgaaaataggctcattggtggtgttgcagagaca
ttatctagtcaaagaaatggattcagtctaaagcatagtttatcgaatcatgaagcaccg
aagtccatgaacaaagatgcacatcatcagtcaacacaagcgataactgacttacgtagc
aatgtgatgtctggtaactggaaagattctgaggaagaggagttcatgtgggatgagatg
aactctggtttgactgataaaggacgcaatgtctctagcaacttgagggcagacccctgg
atggctgatgatgaaaatctgaaaggtgaagatcacctattcacatccaaatcacaccct
tttggggaaaaggttgatagagaaatatctactggtaagaaacaactacctgcatttggg
ggccagtcatcattatcatggcaattgcagaagccgcactcaagggataagttgaatctg
aagccaggtcactctgaaggatctgtttccacccttggtggcttacctggaaatataaat
tcgtcagctgtaaagatgaggaatcggtcttttatgccgaatgcaacgacaggagtggcc
aaaagtatgggacatccgcaatttgattctgggggagctgaatctccttccggacagtca
cctttgagaacccagtctccatcactgtctgtaagcacacacctccctcattcagtgcga
aatttggctgagcaagattatcctccgattcctaaaacatctcaatttttgggaagccaa
tataatccctcccctgcccttcctcacaatgttaaggttggtaacttgcgaaaatcacag
gaccaggacatgcatggtccactatcttctgtaactcctcgcactgatgttactcttaaa
actaagaaggcaccccaatctaaagtttctttagccagtgaaacgtcagcgaagtcaacc
acaaatagtctttcagctgcatctgtgaagactggaatcatccccaacaaatcaactgcc
agtagtcttcctgctacaagttgtctggatggaaggagtcttccatctcaatcagtggtt
cggcctgctaggtcaggtggtccttcccctaccacatcaatacctcaaagaaaggctggt
caaccacaaaggggttctactcaaccagtttcctctaatgtgaacaatgcctcagttttg
agctcaaataccaccaataagaatgccttgaatccaattgaaaaccttttaaactcatta
gtcgcaaaaggtttgatatcagcaaaaacaaagtcagcaactatagtaccaagtgacctg
ttggtgcgatcagaggaccaaactgaaaacattgccaccagtagttctttgctagttcct
tcagttacaagttctgcagttgtcccggaactatcttccagagatgatgtagatgatgct
gcaaaagcatctcaatcaactagcgtagaagttaaagatcttattggctttgattttaaa
cctgatgtaattcgagaaatgcatccacatgtgatcagggaattattggatgatctcccg
catcattgcagaatttgtggtgttaggcttaaacagcaagaacagtttaatagacatttg
gagtggcatgccacaagagagaaagaacaaaatggtctaattttggcatcaagaagatgg
tatgcaaactcaaatgactggattgcttgcaagtctgaatatcaatcagagaatgagtct
actgattctgtagatgtacatgacaaaaagaccgacggtagtcaatgggatactatggtt
ctagcagatgaaaaccagtgcttgtgcgtattttgtggcgagctatttgaagatgtgtac
tgtcaggaaaaggaccagtggatgttcaaagggggtgtttacctgaacaattcagatagc
aaacttgagatgaaaagtagaaacgtaggccccattgttcacgcaagatgtttatcagag
aacccaatgtccaatatcaccaatacagagcatgattaatgc

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