Lotus japonicus: Lj3g3v0934460.1
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Entry
Lj3g3v0934460.1 CDS
T04348
Symbol
Lj3g3v0934460.1
Name
(Kazusa) -
KO
K12880
THO complex subunit 3
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Lj3g3v0934460.1 (Lj3g3v0934460.1)
09122 Translation
03013 Nucleocytoplasmic transport
Lj3g3v0934460.1 (Lj3g3v0934460.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj3g3v0934460.1 (Lj3g3v0934460.1)
03041 Spliceosome [BR:
lja03041
]
Lj3g3v0934460.1 (Lj3g3v0934460.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Lj3g3v0934460.1 (Lj3g3v0934460.1)
Spliceosome [BR:
lja03041
]
Complex C
Other components
EJC/TREX
Lj3g3v0934460.1 (Lj3g3v0934460.1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Lj3g3v0934460.1 (Lj3g3v0934460.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Nup160
MMS1_N
PROPPIN
Motif
LinkDB
All DBs
AA seq
313 aa
AA seq
DB search
MEEQTPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHVEQHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT
HVAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL
RPLETLMAHTAGCYCIAIDPTGRYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISF
NHTGELIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVERNPKYNLLAYTGDEKNKYQA
DEGVFRIFGFENA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaaaccccatttaagaatctccatagcagagagtattctggtcacaagaag
aaggtgcactctgtggcctggaattgcattgggaccaaacttgcctctgggtctgtggat
caaactgctcgaatctggcatgttgagcaacatgggcatggtaaagtcaaagatattgaa
ttaaaaggccacactgatagtgtggatcagctatgctgggatcccaaacatgccgatctg
attgcgactgcatcgggtgacaagaccgttcgtttgtgggatgctcgtagtggaaaatgc
tcacaacaggcagaacttagtggggagaatatcaacattacctacaaacctgatgggact
catgtagctgtgggcaatagggatgatgaattaacaatactggatgttaggaagttcaaa
ccaattcataagcgcaaattcaactatgaggtaaatgagattgcttggaacatgacaggc
gagatgttctttctaactacaggaaatgggactgtggaagtactgacttacccatctctt
cgacctcttgaaaccctcatggctcatacagccggttgttattgcattgcaattgaccca
acaggaagatattttgctgttggaagtgctgattcccttgtcagcctgtgggatatctca
cagatgctctgtgtgcgcacctttacaaagctggaatggcctgtccgtacaatcagtttc
aatcatactggggaacttattgcttcagcaagtgaagacttgttcattgatatttctaat
gttcaaactggacgaacagtgcatcagattccttgtagagctgccatgaacagcgttgag
cggaatcctaaatacaatttacttgcatatactggtgatgaaaaaaacaagtatcaggct
gatgaaggtgtttttcgaattttcggttttgaaaatgcttagcat
DBGET
integrated database retrieval system
