Lotus japonicus: Lj3g3v2518940.2
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Entry
Lj3g3v2518940.2 CDS
T04348
Symbol
Lj3g3v2518940.2
Name
(Kazusa) -
KO
K12133
MYB-related transcription factor LHY
Organism
lja
Lotus japonicus
Pathway
lja04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
Lj3g3v2518940.2 (Lj3g3v2518940.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lja03000
]
Lj3g3v2518940.2 (Lj3g3v2518940.2)
Transcription factors [BR:
lja03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
Lj3g3v2518940.2 (Lj3g3v2518940.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
LinkDB
All DBs
AA seq
436 aa
AA seq
DB search
MDAADSSSEEVIVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKSAV
QIRSHAQKFFTKLEKEALVKGVPIGQAIDIDIPPPRPKRKPSNPYPRKSSAVTATLQSGE
KDVKLNSVESSHVESSHVKLTLDLEKEPLPEKHNVDEGPTTVKENKDGDHLEVFTVGPDV
PYSSVSSANKSSVSTSVPWGSSGALKEITPSLKEVIALDGTNESFITIELGNRKLATNDG
KQTNGCSKDSKLEDSEASQVKLVQSEKTDGLNCAFTIDGMQSNQNYPRHVTVQVFDGNVS
TNTQNPSQDMRLRDSIFQPIGEVNGQPKVFTNSAASNTGESQSNTGQSSIHQSFLPYPPF
TQHNQDDYQSFIHMSSTFSSLVVSNLLQNPAAHAAASFAATYWPHARPETLADSSRCSEG
GFPCRQWALLQVWQLL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcggactcctctagcgaagaagtgattgttaagacaagaaagccatataca
atcacaaagcaaagagaacgatggacggaggaggagcataataggtttctcgaagctctg
aagctacatgggcgagcatggcagcgcatagaagagcatataggaacaaagtctgctgtg
caaatcaggagccatgcacagaagttctttactaagttggagaaagaggccctggtgaag
ggtgttccaattggacaagctattgatattgacattccccctccaaggcctaaaagaaaa
ccaagcaatccttatcctcggaagtcgagtgctgtcactgcaacattacaaagtggagaa
aaggatgtaaaactcaattcagtggaatcttcgcatgttgaatcttcgcatgttaaacta
acactggacttggaaaaagagccacttccagagaaacataatgtagacgaaggtccaaca
actgtaaaagaaaataaggacggagaccacttagaagtatttactgttggcccagatgta
ccttattcctctgtatcttcagcaaacaagagttcagtatcaacgtcagtgccttgggga
agttcaggcgctttaaaggagattacgccttcactgaaagaggtaatagcactagatgga
acaaatgaatcttttatcactattgaacttggaaatcgaaagttggcgaccaatgatgga
aaacagactaatggctgtagtaaagactccaagttggaggattctgaagcttcacaagtg
aaattggttcaaagtgagaaaacagatggtcttaattgtgcatttacaatagatggaatg
cagagcaatcagaattaccctagacatgttactgtgcaagtttttgatgggaatgtaagc
acaaacactcaaaatccatctcaagatatgcggttacgagactccatatttcagccaata
ggagaggttaatgggcaacctaaggtttttaccaattcagctgcatcaaacacaggggaa
agtcaaagtaacacaggacaatcgtctattcaccaatcatttcttccttatcctcccttc
acacaacataatcaagatgattaccaatcatttattcacatgtcctccacattttcaagc
cttgttgtctctaacttgctgcaaaatccagcagctcatgctgcagcaagttttgctgct
acatattggccccatgcacgcccagaaactttagcagattcttctaggtgctccgaagga
ggttttccatgtaggcaatgggctctcctccaagtatggcagctattgtagctg
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