KEGG   Lotus japonicus: Lj5g3v0087430.1
Entry
Lj5g3v0087430.1   CDS       T04348                                 
Symbol
Lj5g3v0087430.1
Name
(Kazusa) -
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
lja  Lotus japonicus
Pathway
lja03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Lj5g3v0087430.1 (Lj5g3v0087430.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj5g3v0087430.1 (Lj5g3v0087430.1)
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj5g3v0087430.1 (Lj5g3v0087430.1)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Lj5g3v0087430.1 (Lj5g3v0087430.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     Lj5g3v0087430.1 (Lj5g3v0087430.1)
SSDB
LinkDB
AA seq 683 aa
MGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQP
RQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVE
DNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSD
GFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQLHSVGDESPSRESSLRQQSPP
PVGKFHRSQLRDLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRETEQPT
TTRFETAAGKGGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLIPPVSAI
ASPPSLGRPKDNSSALPKIPPRRAAQPPRTSALPPASSNLKSAAVQASSSANNALNPIAN
LLNSLVAKGLISAETETTAKVPSEMLTRLEDQSDSITTSSSLPGASVSGSAVPVPSTKDE
VDDGAKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKF
QEQFDRHLEWHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDR
NQEDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGG
GPIIHARCLSENPVSSVLNMEQD
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgggtactggcaggactggtggtagggtggccgagttaggaagtgacaaaagtgggtac
aacaaagctgctggtgctggtgttgcagggaccatatctgggcaaagaaatggtttgagt
atcaagaataactttttgaatactgaagcatccatgattttggatgcacgtaatcagcca
agacaaaacattaatagcctacagagaggcgtaatgtcaaatagctggaaacattctgag
gaagaggagttcatgtgggatgagatgaatgctggattgactggtcacgatgcagccagt
gtccctaacaacttgagcaaagattcttggacttctgatgatgagaatttggaggttgaa
gataatcaccaccaaagcagaaatccctttggggcaaatgttgatacagaaatgtccatt
gaatctcaagcaactgaaaggaaacaattacctgcatttcggcctcatccatcactatca
tggaaattgcaggagcagcactcaattgatgagttgaatcagaagccaggtcactcagat
ggatttgtgtcaactcttggtgccctacctaccaatactaattctgctgctactaggatg
gggaatcggtctttactgccaaaggcaacaattggcttagcaggaaacctgggacaactt
cattctgtgggagatgaatccccttcgagagagtcaagtttgcgacaacagtctccacca
ccagttgggaaattccatagatcacagctaagagacttgcagagtggttcattctcttca
atgacgtttcagccaagtcacaagcagcaactgggctcttcgcacactgaagttactgct
aagactgagaagccacacctgtctaaagttcctctgcctcgagaaacagagcaaccaacc
acaactcgttttgaaactgcagctgggaagggcggaaagttatccaacatgccaattact
aataggcttcctacttcaagaagcttggatacagggaagcttccatctatattaggagat
cggccttcccagtcaagtggttcttcccctgccggattaattcctccagtgtctgcaatt
gcatcacctccctcattaggtcgtcccaaagataattcctctgctctgccaaaaatacct
ccaagaagggctgcacagccaccaaggacatctgctctaccaccagcttcctctaatctc
aaaagtgctgcagtccaggcatcaagttctgccaataatgccttaaatccaattgcaaac
cttttaaactcattagttgcaaagggtttgatctctgcagaaaccgagacaacagctaag
gtgccatctgagatgctgactcgattggaagatcaaagtgacagcattaccaccagtagc
tctttgcctggtgcttcagtgtctggttctgcagtcccagtcccttctaccaaagatgaa
gtagacgatggtgcaaaaacacctatatccttatctgaatcaaccagcacagaaatcaga
aatttcattggctttgagtttaagcctgatgtaatccgagagttgcatccatctgtaatt
agtggattatttgatgattttccacatcattgcagcatttgtagccttaagcttaaattc
caagaacagttcgatagacacttggagtggcatgccacaagagaaagagaacacagtggt
ctaattaaggcatcgagatggtatctgaaatcaagtgactgggttgttggcaaggttgaa
agtctatctgaaaatgagttcgctgattctgtagatagatatggcaaggaaacagacaga
aatcaagaggatgcaatggttctagctgatgaaaaccaatgcttgtgcgtgttgtgtggt
gagctatttgaagagttttactgtcaggaaaatggtgagtggatgttcaaaggggctgtt
tatgtgcctaactctgatatcaatgatgatatgggaattagagatgcgagtacaggaggg
ggtcccatcattcatgcaagatgcttatcagagaacccagtttccagtgtcctgaacatg
gagcaggattaaagc

DBGET integrated database retrieval system