Lactobacillus johnsonii DPC 6026: LJP_1286c
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Entry
LJP_1286c CDS
T01960
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
ljh
Lactobacillus johnsonii DPC 6026
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ljh03019
]
LJP_1286c
Messenger RNA biogenesis [BR:
ljh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LJP_1286c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_2
AAA_18
AAA_22
Rad17
Myosin_head
SKI
AAA_16
AAA_28
AAA_30
AAA_33
Bac_DnaA_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEB93608
LinkDB
All DBs
Position
complement(1378375..1379250)
Genome browser
AA seq
291 aa
AA seq
DB search
MAEQKKQLLIVTGMSGAGKTVAIKALEDMGYFVVDNLPPELLGSFWELINNSSDFSKAAV
VVDLRVKSFYKDLVDEIKSLEDSQNVQSTVLFLDASDDVLVSRYKETRRLPPLAHTGRLL
DGIQEERNILSRTKNISNIIIDTSHLSTKELKTKLVDKFGDNRTRTFSIEVMSFGFKYGI
PIDADIVMDVRFLPNPFYIPQLKPFTGLDRRVFDYVMSKKETKEFYAKFLDMLETAIPGY
IAEGKEKLTIAIGCTGGQHRSVSIARQLAVDLAKKYPVDISHREISRYIGQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaagaaacaattattgattgttactggtatgagtggtgcaggtaaaact
gtggcaattaaagcattagaagatatgggatatttcgtggtagataatttaccaccagaa
ttattgggaagtttctgggaattaattaataattcttcggattttagtaaggcagcagta
gttgttgacttgagagtaaagagtttttataaagatttggttgatgaaatcaagtcttta
gaggatagtcaaaatgttcagtcaacagttttgtttttagatgcttcagatgatgtctta
gtgtctcggtataaagaaacaagacgtttgcctcctttggctcatacaggtagattgctt
gatggaattcaagaagaaagaaatattttatcaagaaccaagaatatttcaaacataatt
attgatacctcccatttatctaccaaggaattaaagacaaaattagtagataagtttgga
gataatcgaactcggacgttttcaattgaggtaatgagttttggatttaaatatggtatt
ccaattgatgcagatattgtaatggatgtaagatttttgccaaatccattctacattccc
caacttaagccatttactggtttagatcgtcgagtttttgattatgtaatgagcaagaaa
gaaactaaagagttttatgctaagtttttagatatgttggagacggctattccaggatat
attgctgaaggaaaagaaaaattgactattgcaattgggtgtacaggtggtcagcacaga
agcgtttcaattgcacgccaattagcagttgatttagctaaaaaatatcctgttgatatt
tctcaccgagagattagtcgttatattggacaataa
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