Legionella jordanis: NCTC11533_01331
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Entry
NCTC11533_01331 CDS
T06275
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ljr
Legionella jordanis
Pathway
ljr03030
DNA replication
ljr03430
Mismatch repair
ljr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ljr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11533_01331 (holB)
03430 Mismatch repair
NCTC11533_01331 (holB)
03440 Homologous recombination
NCTC11533_01331 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ljr03032
]
NCTC11533_01331 (holB)
03400 DNA repair and recombination proteins [BR:
ljr03400
]
NCTC11533_01331 (holB)
Enzymes [BR:
ljr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11533_01331 (holB)
DNA replication proteins [BR:
ljr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11533_01331 (holB)
DNA repair and recombination proteins [BR:
ljr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11533_01331 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DUF4264
Dynamin_M
Motif
Other DBs
NCBI-ProteinID:
VEH12478
LinkDB
All DBs
Position
1:1438743..1439663
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AA seq
306 aa
AA seq
DB search
MQSSKIPQFSADYAKWWERFCNIYRHERLPHAFLLVSPATMTSLDFVYTMAAVLLCNRET
KPCGECQSCRLVSAKMHPDLNVIKPDKAGGIIKIDQIRELQDLAYHSPQLGVRRIILLQP
AEKMNVPAANALLKLLEEPPTSLTFILLAEHISTILPTILSRCQQWHLPLAQDWTALSAE
GAADKSEREKLLAEREEIIQELISLVKGNISVCALASKWAIHGFSDLIWLLSLINAQMLK
YLLAGSKEEHSEAQLLQELANCFTPPILFRQMDELYSIVKKLNKNLNINPLLTLENLLLG
YKSFPG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttctaaaattcctcaattttcagctgattatgcaaaatggtgggagcgcttt
tgcaatatttaccgccatgaaagattgcctcacgcttttttgttggtttctcctgcgacc
atgacttctctcgattttgtctataccatggctgctgtattgctttgcaatcgagaaacc
aagccttgtggcgaatgtcaatcatgtcgcttagtttccgctaaaatgcatccagattta
aatgtaataaaaccggataaggcggggggcataataaaaattgatcagattcgtgagcta
caagacctcgcttaccattctccccaattgggagtaagacgtataattttgctgcaacct
gcagaaaaaatgaatgtgccagcggccaatgcgctgttaaaacttctggaggaacctcct
acttccctcactttcatattacttgcagagcacattagcacaattttacccaccatatta
agtcgatgccagcaatggcatctccctttagctcaagattggactgccttgtcagcggaa
ggggccgcggataaaagtgagcgggaaaaattgcttgctgagcgcgaggaaatcattcaa
gagctcattagcttggttaagggtaatattagcgtttgcgctctggcttcaaaatgggct
attcacgggttttcggatctcatttggctactctctttaatcaatgcccaaatgcttaaa
tatctgctggcaggctcaaaagaggagcacagtgaggctcagttattacaagagttggca
aactgctttactccaccaatcttatttcgtcaaatggatgagttatacagtattgttaaa
aaattaaacaaaaatctaaatattaatccattactcaccttggaaaatttgctcttgggt
tataagtctttccctggttag
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