Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_1853
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Entry
WANG_1853 CDS
T01526
Name
(GenBank) possible DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Pathway
lke03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WANG_1853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lke03021
]
WANG_1853
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_1853
Transcription machinery [BR:
lke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WANG_1853
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WANG_1853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF3632
DUF5611
Motif
Other DBs
NCBI-ProteinID:
AEG41548
LinkDB
All DBs
Position
2046946..2047488
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AA seq
180 aa
AA seq
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MGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLDKSDEEIRERLPQFYT
DMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEDDDDSRKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDATADDSDDDSDYDEDNDDADDVLPDGIEGQLSQLNDDDDDDEDD
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaaccgtgatgaattgtcaatgatcgaagttgct
cgtgcaattttggaagacaatggtaagagaatggcatttgccgatattgttaatgccgta
caaaaatacttggacaagagtgacgaagagattcgtgaacgtttgccacaattctatact
gacatgaacactgatggtgaatttatttcaatgggtgaaaatgtgtgggcacttcgttca
tggttcccatatgaatcagttgatgaagaggtcaaccacccagaagatgaagacgatgat
gattcacgcaagcaccataagaaggttaatgccttcttagcaagtgctactggtgatgat
gacattatcgactacgataatgacgatccagaagacgacgacttagatgccactgctgat
gatagtgatgatgattctgattatgacgaagataatgacgatgcagatgatgttttgcca
gatggcattgaaggtcaattatcacaattaaacgatgacgatgatgacgacgaagatgat
taa
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