Lentilactobacillus kefiri: DNL43_09115
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Entry
DNL43_09115 CDS
T06710
Name
(GenBank) ATP-dependent helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lkf
Lentilactobacillus kefiri
Brite
KEGG Orthology (KO) [BR:
lkf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkf03019
]
DNL43_09115
03009 Ribosome biogenesis [BR:
lkf03009
]
DNL43_09115
Enzymes [BR:
lkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DNL43_09115
Messenger RNA biogenesis [BR:
lkf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DNL43_09115
Ribosome biogenesis [BR:
lkf03009
]
Prokaryotic type
rRNA helicases
DNL43_09115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF2608
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
QGV25418
LinkDB
All DBs
Position
1903963..1905324
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AA seq
453 aa
AA seq
DB search
MSNFSEFNLKPFLLDAVKELNFSKPTPVQEKVIPVIMQGRDVVGQSATGSGKTHAFLLPI
FNQLDPDKDEVQAVITTPSRELAYQIIDAAKQIAKHCDQPISIGHYVGGTDKVRQEKKIK
HEQPQLVIGTPGRIWDLIQNGGLDVHTASQLVIDEADMTLDMGFLDVVDHIAASFGKHVQ
MMVFSATIPQKINIFLKKCMVNPFIEEIPVSTIISPTIDNWLISTKGQDKNQLIYKLLTI
GEPYLVLIFANTRKRVEELTNYLKGQGLNVAMIHGGMKPRERKQVMRRVKNLDFQFVVAT
DLAARGIDIQGVSDVINDDIPTEDLEFFIHRVGRTGRNGMSGTSITLYSPDEEKAVEELE
DMGIHFKPKALKNGEIVDSYDRNRRKTHRKKHDKLDPTMIGMIKKKKKHIKPGYKRRIKN
TIARKDEVDRRVAKREEARSKRKQRKNSSSRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttttcagaatttaatttaaaaccttttttactggatgcagtcaaggagcta
aatttcagcaaaccgactccggttcaggaaaaagtgattcccgtcatcatgcagggaaga
gacgtggttggccagtcagcaaccggtagcggtaaaacccacgcgtttttgctgccaatc
tttaatcagctggatccggataaagacgaagtccaagcggtgattacgacacccagtcgt
gagctggcatatcaaattattgatgctgccaaacaaatcgccaaacattgcgatcagccg
atttcgattggtcattacgttggcggaaccgacaaagttcgccaggaaaagaaaatcaag
catgagcaaccccaattagtgattggaacccctggaagaatctgggatttgattcaaaat
ggtggcttggatgttcatacagcttctcagttagtcattgacgaagcagatatgacactt
gatatgggattcttggacgttgtcgatcatattgctgccagctttggtaaacatgtccaa
atgatggtcttttcagcaactattccacaaaagatcaatatttttcttaaaaaatgtatg
gttaatccatttattgaagaaattcctgtttcaacaattattagtccaaccattgataat
tggctgatttcaaccaagggtcaggataagaaccagcttatttacaagctgctgacaatt
ggtgagccatatttggtgctcatttttgcgaatacccggaagcgggttgaagaattaacc
aactacttaaaaggtcagggcttaaatgttgcgatgattcatggtgggatgaagccacgt
gaacgtaagcaggtcatgagaagagtcaagaacctcgattttcaatttgtggttgcaact
gatttagctgctcgtggaattgatatccaaggggtttccgatgtcattaacgatgatatc
ccaaccgaggatttggaattcttcattcatcgtgtcggccggactggccgaaacggaatg
tccggaacttcaattaccctgtattctcctgatgaggaaaaagcagttgaagaactggaa
gacatgggcattcatttcaagcctaaagcacttaaaaatggcgaaattgttgactcgtat
gatcgaaatcgacgaaagacccaccgaaagaagcacgataagcttgatccaaccatgatt
ggtatgattaaaaagaaaaagaagcatatcaaaccaggctacaaacgccgcattaagaac
acaattgcccgtaaggatgaggtggatcgacgggttgctaaacgtgaagaagccagatca
aagcgaaagcagcgaaagaatagttcgtcacgttatagataa
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