Lactobacillus kullabergensis: DKL58_06160
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Entry
DKL58_06160 CDS
T06382
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lkl
Lactobacillus kullabergensis
Pathway
lkl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DKL58_06160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkl03400
]
DKL58_06160
Enzymes [BR:
lkl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DKL58_06160
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DKL58_06160
DNA repair and recombination proteins [BR:
lkl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DKL58_06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
ZNF512_C2H2
DZR
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AWM75586
UniProt:
A0A2Z3HNI4
LinkDB
All DBs
Position
complement(1302414..1303244)
Genome browser
AA seq
276 aa
AA seq
DB search
MPEMPEVETVRRTLLPLIKGKTIKEVTVWYPKIITGDAKEFAKQLTGKKIENIDRYAKYL
LIRLSDNLTIVSHLRMEGKYRLVKINTKKDKHDHVQIVFKDNSALRYNDVRKFGRMQLIK
TGTEREKTGIGKLGVEPNSAAFTVSYLQNGLARKKKNIKNTLLDQSIVAGLGNIYVDEVL
WETKIHPLSQANAIPAEKIAQLHDNINSLIELAIAERGTTVHTYLDANGKTGGFQKMLQV
YGHKGEPCVRCGTPLEKIKVNGRGTTFCPKCQVIYK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatgccggaagttgaaactgttaggcgaacacttcttcctcttatcaaagga
aaaacaataaaagaagtaactgtatggtaccccaagattatcacaggagatgctaaagaa
tttgcaaaacagctaactggaaaaaagatagaaaatatagatcgttacgctaaatatttg
cttattcgtctcagtgacaatttaacaatagtgtctcatttacgcatggaaggtaaatat
cgtttagtcaaaataaatactaaaaaggacaaacacgaccacgtgcaaattgtttttaaa
gataattcagcattgcgctataatgatgtgcgtaagtttggccgaatgcagctgattaag
acggggactgaaagggaaaaaactggtattggcaaattaggtgttgaacctaattcagca
gcttttaccgtttcgtatctacaaaatggtttagcgcgtaaaaagaaaaatattaaaaac
acactccttgaccaatctattgttgcaggtttgggcaatatctacgttgacgaggttttg
tgggaaacaaaaattcacccgttaagtcaagccaatgccattccagcagaaaagatagcg
caattgcacgacaatattaattcgttaatagaattggcaattgctgaaagaggtactaca
gttcatacctatctggatgcgaacgggaagacaggaggttttcaaaaaatgttgcaagta
tatggacataaaggcgagccttgtgtgcgttgtggcacacctcttgagaaaattaaggta
aatggacgaggaactactttttgccctaagtgtcaggtgatttataaatga
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