Apilactobacillus kunkeei: APS55_05715 Help Entry APS55_05715       CDS       T04112                                  Name (GenBank) Zn-dependent hydrolase   KO K12574   ribonuclease J [EC:3.1.-.-] Organism lku  Apilactobacillus kunkeei Pathway lku03018   RNA degradation Brite KEGG Orthology (KO) [BR:lku00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     APS55_05715  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lku03019]     APS55_05715 Messenger RNA biogenesis [BR:lku03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      APS55_05715 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_C Lactamase_B RMMBL Lactamase_B_6 DUF6483 DUF5641 Motif Other DBs NCBI-ProteinID:  ALJ31727 LinkDB All DBs Position 1223885..1225576 Genome browser AA seq 563 aa AA seqDB search MKNSVKIIPLGGVRESGKNLYAVEINNGIYVLDCGLKYPENDMLGIDVVIPDFTYLRENK EKIIGVFLSNSDMDSIGALPYFVSEFDVPVFGSKLTIEMAKYEVKNNERSKKFNNFNVIN EKSEILFDDVTVTFFKTSHSVPDSMGISLAVEEGQIVYTGDFKFDPALRNGFATDYSSIA KVGNKKVIALLADSQNADNPFPMANEIQASQYIFDTFEDSKSRVIVAANSANLLRIQQVF DAAAKSERKVFVGKHLDPKVKLAIDSGYINIAEDLLIEDIEELKKLENDEIVVLETNPVS EPIKLVQRMAAQQQKDINIESGDVVLIVTSPSPAMDNSMAKTDDMVYQADGTVKVISNDL NVSDHASAEDIQMLISLLKPQYFIPVSGEYMMMNESKRAATNMGVDEDKILILSKGETIE YDGAKFHHGNAVEAGNTMIDGIGVGDIGNIVLRDRKVLSEDGIFIVVVTIDRKKKIIISR PKITSRGFIYVKSNKDLMNEAAEIVSKTIQLNLDNKEFDWSHLKQSVREKISHFLFDKTK RRPVILPVIMEVNQHHKKKRPQK NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt atgaaaaatagtgtaaaaattattcccttaggaggagtaagggagagtggcaagaaccta tatgccgttgagattaacaatgggatttatgttttagattgcggtctaaaataccctgaa aatgacatgttaggaattgatgtagttattcctgatttcacatacttacgtgaaaacaag gaaaagattatcggagttttcctatctaatagtgacatggattcaattggcgcactacca tatttcgtcagtgaattcgatgttccggtattcggatcaaaattaaccattgaaatggct aagtacgaagttaagaataatgaaagatcaaagaagtttaacaatttcaacgtaatcaac gaaaagagtgaaattctttttgatgacgttacagttactttctttaagactagtcactca gttcctgactcaatgggaatttcattggctgttgaagaaggccaaatcgtatacactggt gactttaagtttgatccagcattacgtaacggttttgcaactgattacagttcaatcgca aaggttggtaacaagaaggttatcgctttattagcagactcacaaaatgcggataatcca ttcccaatggcaaacgaaattcaagctagccaatacatctttgatactttcgaagatagt aagagtcgtgtgattgttgcagctaactctgctaacctattaagaatccaacaagtattt gacgcagctgcaaagtctgaaagaaaagtatttgttggtaagcacctagatcctaaagtc aaactagcaattgattctggatacattaatatagcagaagacttattaattgaagacatc gaagaactaaagaagcttgaaaacgacgaaattgttgtattggaaactaatccagttagt gaaccaatcaagctagttcaaagaatggccgctcaacaacaaaaggatatcaacatcgaa tctggtgacgttgtactaatcgttacttcaccatctccagcaatggataacagcatggct aagactgatgacatggtatatcaagcagacggtacagttaaggttatttcaaacgaccta aatgtttccgatcacgccagtgccgaagacatccaaatgctaatcagcttgttgaaacca caatacttcattccagttagtggtgaatacatgatgatgaacgaaagcaaacgtgctgct actaacatgggtgtagacgaagataagattttaatcctaagcaagggtgaaactatcgaa tacgatggtgctaaattccaccatggtaacgctgttgaagcaggtaacactatgattgat ggtatcggtgtcggagacattggtaacatcgttttacgtgaccgtaaggtattatcagaa gatggtatcttcatcgttgttgttacaattgatagaaagaaaaagattatcatttctcgt cctaagataacttcaagaggattcatttacgttaagtcaaacaaggacctaatgaatgaa gcagctgaaattgtttccaagaccattcaattaaaccttgataacaaggaatttgattgg agccacttgaagcaatcagtaagagaaaaaatcagtcacttcttatttgataagacaaaa cgtcgtccggtaattcttccagttattatggaagtaaaccaacatcataaaaagaagcgt ccacaaaaataa

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