Legionella longbeachae: LLO_1004
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Entry
LLO_1004 CDS
T01183
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
llo
Legionella longbeachae
Brite
KEGG Orthology (KO) [BR:
llo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LLO_1004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llo03400
]
LLO_1004
Enzymes [BR:
llo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
LLO_1004
DNA repair and recombination proteins [BR:
llo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LLO_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
CBJ11356
Pasteur:
llo1004
UniProt:
D3HR29
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All DBs
Position
complement(1185531..1186412)
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AA seq
293 aa
AA seq
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MKIAGIDISHADKLLYPDDKISKGEVAEYFYKISDYLLPFVQKRLITLKRYPEGINENGF
YNKHRPDYFPDFIKEYTVPTLKDNSEMNMVGISSKKALVYLAGQDVLELHISLSTISSIE
KPDQIIFDFDPQDDDFEKVREAAFTLKKIFEEYDLTAFVKTSGSRGLHIHLPLKTHYKFD
KIKSISRKIAERLHQKCPKITTLEHRKDKRGNKVFIDFLRNDYAMTAITPYSLRARKGAP
IATPLEWEELNDNSLTPRSYHLKNIFQRLEKKPNPWKNFNRYNRNIDINDLFK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctggtattgatatctcgcatgcagataaattactttatccagatgacaaa
atttcaaaaggggaagttgcagaatatttttataaaatctcggattaccttttgcctttt
gtacaaaaaagactaattactctgaaacgatatcctgaggggatcaacgaaaatggtttt
tataacaagcatcgtcccgattattttcctgatttcattaaagaatatactgtacccacc
ctgaaagataattctgaaatgaacatggtgggaattagttccaaaaaagcattagtctat
ctggcaggtcaagatgttcttgaattacatatttcattatcaacaatatcttcaattgaa
aagcctgatcaaattatctttgactttgatccccaagatgatgattttgaaaaagtgcgt
gaggcagcatttactttaaaaaaaatatttgaagaatatgatctcactgcttttgtcaaa
acatctggttctcgtgggcttcatattcatttgccactaaaaacgcactacaaattcgat
aagattaaatctatatcacgaaaaattgcagaaagactacatcagaaatgtcctaaaata
accaccctagaacatagaaaagacaaacgtggcaataaagtgtttattgattttttacgc
aatgattatgccatgacagcaatcacaccctattctttacgagccagaaaaggagcgcct
atagcaacccctttggaatgggaagagttgaatgataattcattaacccctcgatcttat
catttaaaaaatatttttcagcgcttagagaaaaaaccaaatccctggaaaaacttcaac
cggtataaccgtaacatagatataaacgacctattcaagtaa
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