Lutra lutra (Eurasian river otter): 125079188
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Entry
125079188 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125079188
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125079188
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
Helicases
125079188
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
125079188
NCBI-ProteinID:
XP_047548606
LinkDB
All DBs
Position
10:5919446..6190936
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AA seq
872 aa
AA seq
DB search
MGKTAESRGSGGRPDPVRSFNRWKKKHSHKQSQKKQLRKKLKKPEWQVEREAISRLMQNY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK
ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEEKGMVQQLLQKKVPVKEIKINPEKLIDIQKKLEAFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEIFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKELVVSPDNKVIEPRASS
LTNDEVEEFRAYFNEKMSILQKGGKRPEGTEYTLANEISDEEEEEKEDEEETEEKLAKAK
ESQPLSVPSTGEAKEAPGQFLDRDEEEEDGQDADFFTVKRHNVFGLDLQENKALQKKEPS
KSSVKKKVTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSVLKDTEDEDSTGGI
NLDKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREASKRQAKVRDEEEAFLDWS
DDDDDGFDPSTLPDPDKYRSSEESDSEDLENKISDTKKKQGLRKRNNSGMEDVGPTNRNG
KKAKWETLEPLDTGLSLAEDEELVLHLLKSQS
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactgccgagtctcgggggtcgggaggccggcccgacccggtgcggagtttt
aaccgttggaagaagaaacacagccataagcagagccaaaagaagcagttgaggaagaag
ctgaagaagcccgagtggcaggtggagcgcgaggctatcagccgcctcatgcagaactac
gagaagataaatgtaaatgaaattacaagattttcagatttccccttgtccaaaaaaaca
ttgaaaggtttacaagaagcccagtaccgtttggtaactgagatacagaaacagaccatc
ggcttggctttgcaaggtaaagatgttcttggagctgccaagacaggatctggcaagact
ttggctttccttgttccagtgctggaagccttatatcgtctccagtggacgtcaacggat
gggctgggggttctgattatatcacctacgagagaactagcctatcagacctttgaggtt
ctccggaaagtaggaaagaatcatgacttttccgctggtctcatcattggtggaaaggat
ctgaaacacgaagctgagaggatcaataacataaatatacttgtttgcactccgggtcgg
cttcttcaacacatggatgaaacaatatgttttcatgctaccaatctccaaatgttagtt
cttgatgaagcagatagaatcttggatatgggctttgctgataccatgaatgctattatt
gaaaaccttcccaagaaacgtcagactttactcttttcagctacacaaaccaaatctgta
aaggaccttgcacgcttgagtttgaaaaaccctgagtatgtctgggttcatgaaaaagca
aaatacagcacccctgccactttggaacagaactacatagtttgtgagctgcagcaaaaa
ataagtgtgttgtattccttcttgagaagccacctgaagaagaaaagtattgtatttttc
tccagttgtaaagaggttcagtatctgtaccgagtgttctgccggctccgtcctggcatc
tctatccttgccctgcatggccgccagcagcagatgagaaggatggaagtctacaacgaa
tttgtccgcaagagagctgctgtgctctttgctactgatatagccgccagggggctggat
ttcccagctgtgaattgggttcttcagtttgattgtccagaggatgccaacacgtatatt
cacagagcaggtagaactgccaggtacaaagaggatggtgaagccttattaattctgctt
ccctcagaagaaaaagggatggtgcagcagcttctccagaagaaggtgcctgtaaaggaa
atcaaaatcaacccagaaaaacttatagacatccagaaaaaattggaggcatttttagct
caagatcaagatttaaaagaaagagctcaaaggtgttttgtctcttatatacgctccgtg
tatctgatgaaggataaggaaatatttgatgtgagcaagttacctatacctgagtatgcc
ctgtctcttggtcttgctgtggcaccacgggtgagatttcttcagaaaatgcagaaacaa
cccaccaaggaactggtggtgagcccagataataaagtaattgagccaagggcttcctcc
ctcacgaatgatgaagtggaagaattcagagcctactttaatgagaaaatgtccatcctt
cagaaaggtgggaaaagaccagaagggacagaatacacactggctaatgagattagtgat
gaagaggaggaagagaaggaagatgaggaagaaacagaagagaagctggcaaaagcaaaa
gagtctcagcctctatctgtccctagcactggggaggccaaggaagcccctgggcagttc
ttggacagagacgaggaggaggaggatggacaggatgctgatttctttacagtgaagcgg
cacaatgtatttgggttggaccttcaagagaacaaagcactacagaaaaaagaaccttcc
aaatccagtgtcaagaaaaaagtgaccaaggtcgcagaagcaaaaaaagtaatgaagaga
aattttaaagtgaataagaagataacatttactgatgaaggggagttagttcagcagtgg
ccacagatgcagaaatctgtcttgaaggacaccgaggacgaggacagcactggtggcatc
aacttagataaagccaaggaaaggctacaagaagaggacaagtttgacaaagaagaatat
aggaagaagatcaaggcaaagcatcgggagaaaagactgaaggaaagggaagccagaaga
gaagccagtaagagacaagcaaaggtcagagatgaagaggaagcctttctggattggagt
gatgatgatgatgatggatttgatccgagcacacttccagatccagataagtacagaagc
tctgaagaatcagatagtgaagacctggaaaataaaattagtgataccaagaagaagcag
ggattgagaaaaaggaacaacagcggaatggaagacgtgggacccacaaatcgtaacgga
aagaaggccaagtgggagaccttagagcctttggatacaggtctctctttagcagaggat
gaagagctggtgttacatctgcttaaaagtcaaagctag
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