Lutra lutra (Eurasian river otter): 125085456
Help
Entry
125085456 CDS
T08100
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125085456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125085456
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125085456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
TIP49
AAA_5
AAA_14
AAA_2
AAA_33
AAA_28
Zeta_toxin
nSTAND3
Mg_chelatase
RNA_helicase
AAA_18
NACHT
IstB_IS21
AAA_3
ABC_tran
Rad17
Viral_helicase1
TsaE
NB-ARC
ATPase
AAA_17
Sigma54_activ_2
Parvo_NS1
Vps4_C
TBPIP_C
Motif
Other DBs
NCBI-GeneID:
125085456
NCBI-ProteinID:
XP_047559752
LinkDB
All DBs
Position
15:30641434..30743606
Genome browser
AA seq
916 aa
AA seq
DB search
MKPRPARFVDNRLKQRVVQVDTVRGLFSAASRTGWTGCLSRPGSWAYLTSNKCGKYVDIG
VLASDLQRMYSIDYGRRKRNAFRIQVEKVFNIITSEKELKDLTELEDEHLAKRARQGEDD
NEYTESYSDDDSNMEDYPDPQAANHMNSSLLSLYRKGHSDSVSSTPEMEPRETTGSTPWT
PSGTGSILLKTPVRGSEGGWFIDRTGGKMDLTDEKSNHKKPGSEIGDSKDASLLESSEKR
KGRLKSKGSKRKKDLQEVDGEIEAVLKRKAKAKELELQVSKVKFEDVGGNDTTLKEVCKM
LIHMRHPEVYCHLGATPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSG
ESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNTMAT
TARVLVIGATNRPDALDPALRRAGRFDREICLGIPDEASRERILRTLCRKLRLPESFPFC
HLAHLTPGFVGADLMALCREAAMGAVSRVLMTWQEQQTMDPETAGSPPGRGQEDPMGAEP
TPEPPVCSVQDELKWLLELLRSQDPLSEEQLQGLCIEWDDFTAALSSVQPSAKREGFVTV
PNVTWADIGALEDIREELTMAILAPVRNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAV
ANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRET
GASVRVVNQLLTEMDGLEARQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL
AILKTITKNGTRPPLGADVSLEALAADLRCDCYSFPDCCGCLHQLSVPSSRRPEQTFQCS
CFSPEEGHLGADLSALVREASVCALRQEMTRPKGGGEAGELKVSQKHFEEAFKKVKSSIS
KKDQVMYEALQRSLSR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaagccacgacccgcgaggttcgtggacaacaggctgaagcagcgagtcgtgcaggtg
gatactgtgcgcggcctcttctcggcggcttccaggacagggtggaccggctgcctgtca
cgacccgggtcctgggcgtacctcaccagtaacaaatgtggcaaatatgtggacattgga
gtcttagcatctgatttacaaagaatgtacagtatagactacggtcgaagaaaaagaaat
gcttttaggattcaggtagaaaaagtatttaatataattactagtgagaaagaacttaag
gatctaacagaattggaagatgaacatctggcaaaaagagcaagacaaggcgaagacgat
aatgagtatactgaaagctattcagatgatgattcaaatatggaagactacccagatcca
caggcagcaaatcacatgaacagctccctactctccttatatcggaaaggacattctgat
tctgtttcaagtactcccgagatggagcccagagaaaccactggttcgaccccatggaca
ccttcgggaacaggctccatcctgttaaagaccccggtcagaggttctgagggagggtgg
tttatcgacagaactggtggaaagatggacttgacagatgagaagagtaatcacaagaag
ccaggatctgagataggggattccaaggatgcttctcttctggagagtagcgaaaaaagg
aaaggtaggctgaagagcaaaggaagcaaaaggaagaaagaccttcaggaagtagatgga
gaaatcgaagctgtcctgaagcggaaagctaaagccaaggagctagagttacaggtctcc
aaggtgaagtttgaagacgttggaggcaatgatacaacattaaaggaagtctgcaagatg
ctcatccacatgcgtcaccctgaggtgtactgccacctgggtgccaccccgccgcgcgga
gtcctgctgcacgggccgccaggctgcgggaagaccttgctggcgcatgccattgccggg
gaactggacctcccgattctgaaggtagctgccacagagattgtgtccggagtgtctggg
gagtcggagcagaagctgagggagctgtttgagcaggccgtgtcaaatgcaccttgtgtc
ctttttattgatgaaattgacgctattactcccaagagggaagttgcttcaaaagacatg
gaacgaagaattgtagcccagctcctcacctgcatggatgatctgaacaccatggccacg
acggcccgggtccttgtcattggagccaccaaccgaccagacgctttagaccctgctttg
agacgcgcaggaaggttcgaccgagagatatgcctagggatcccagatgaagcctccagg
gaaagaatacttcgaactttgtgcagaaaactcagacttccagaaagtttccctttttgt
cacttagcacacctgacaccaggcttcgttggtgctgacctgatggcgctgtgccgagag
gcggccatgggggcggtcagcagggtcctgatgacatggcaggaacagcagaccatggat
cccgagactgcaggttcgccccctggacgaggccaagaagacccgatgggagccgagccc
actcctgaaccaccggtgtgttctgtgcaggatgagttgaagtggctgctggagctgcta
agaagccaagaccccctgtccgaggagcagctgcagggactgtgcatcgagtgggatgat
ttcactgctgccctctcctcagtccagccctctgccaaaagggaaggctttgtcaccgtc
cccaatgtgacttgggcagatattggtgccctggaagatatccgggaggagctcaccatg
gcaatactggcaccggtgcgcaaccccgatcagttccgagctcttggattggtgactccc
gctggggtcctcctggccggccctcccggctgtgggaaaacgctgctggcaaaggctgtt
gcaaatgagtccggactgaactttatatcggtcaagggacctgaattgctcaacatgtac
gtcggtgagagcgagcgtgccgtccgccaggtgttccagcgagccaggagctccgctccc
tgcgtcatcttctttgatgaagtagatgccctctgccctcggaggtcagaccgggagacg
ggagcaagtgtccgggtggtgaatcagctacttaccgagatggatggtctggaagctcgg
cagcaggttttcatcctggcggccaccaaccggccagatatcattgaccctgcgatcctg
cgccctggacgcctggacaaaacactgtttgtgggtttgccacctcccgcagaccgtttg
gccatcctaaaaaccattacaaaaaatggcaccagaccacccctgggtgcagacgtgagt
ttggaagccctcgctgctgacctgcgctgtgattgctactccttccctgactgctgtggc
tgccttcaccagttgtccgtcccttcttccagaagacctgagcagacatttcagtgttcc
tgcttcagccctgaagagggtcatctaggtgcagatctctctgctttggttcgggaagcg
tccgtctgcgccctgagacaggaaatgacaagaccgaagggtggaggtgaggcaggtgaa
ctgaaggtcagtcagaagcactttgaagaagctttcaagaaagtgaaatcttctatatca
aaaaaggaccaggtgatgtatgaagctctgcagcggtccctcagccggtga
DBGET
integrated database retrieval system
