Lutra lutra (Eurasian river otter): 125091851
Help
Entry
125091851 CDS
T08100
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125091851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125091851
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125091851
U7-dependent histone pre-mRNA processing factors
125091851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125091851
NCBI-ProteinID:
XP_047571887
LinkDB
All DBs
Position
X:complement(43877777..43901764)
Genome browser
AA seq
668 aa
AA seq
DB search
MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQPVHSAGPGSGSTVSMNQQNPQAPQAQALGGMHVN
GAPPLMQASMQAGVPAPGQMPAAVTGPGPGSLAPGGGMQAQVGMPGSGPVSIERGQGTLQ
HSPVGPAGPASIERVQGQRTWMIWASVRGCTPSLLVSGGLDGIAVLPMQDPRAAMQRGPL
PANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHVPGHDSRGPPPHE
MRGGPLAEPRPLMAEPRGPMLDQRGPPLDGRGGRDPRGIDTRGMEARAMEARGLDARGLE
ARAMEARAMEARAMEARAMEARAMEARAMEVRGIEARSMDTRGPVPGPRGPMPTGIQGPS
PINMGAVGPQGSRQVRKLRSKNSGDLSKFTQLKSGRARNRTHCFFQCTTQSCYLHIMYVY
MCICLPFFNRKYEYVVFWCVKENYSLFFKLCFLKMCLGALMFILPSRISSLKIETVFIHL
LTQSANIY
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgtgagagaccccgcggtggatcgttctctgcgttcggtgttcgtg
gggaacattccatatgaggctactgaagagcaattaaaggacatcttttctgaggttgga
cctgttgttagtttcaggttggtatatgatagggagacgggaaagccaaagggttatggc
ttctgtgaataccaagaccaggagacagcacttagtgccatgcgaaacctgaatgggcgt
gaattcagtgggagagcacttcgagtggacaatgctgccagtgaaaagaacaaagaagag
ctgaagagccttggcactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctttgtgtccagaatagtccccaggaagcacggaac
atgttgcttcagaaccctcaactggcttatgctttgctacaagcgcaggtagtgatgaga
attgtggatccagagattgctctgaaaatcctgcatcgccagacaaatatcccaacactg
attgcaggcaaccctcagccagtccacagtgctgggcctggctcaggatccactgtgtca
atgaaccaacagaatcctcaggcccctcaggcccaggctttgggtggaatgcatgtcaat
ggtgcacctcctctgatgcaagcttctatgcaggctggagttccagcaccaggacagatg
ccagcagctgtaacagggcctggtcctggttccttagctcctggaggaggaatgcaagcc
caggttggaatgccaggaagtggaccagtgtccattgagcggggacaaggaaccctacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagggcagagaaca
tggatgatatgggcatctgtccgaggctgtactccctccctactggtgtcaggaggcttg
gatggaatagcagtcttgccgatgcaggaccccagagccgctatgcaacgtgggcccttg
cctgccaacgtcccaactcctcgaggtctattaggagacgccccaaatgacccgcgtgga
ggcactttactttctgtaactggagaggtagagcctagaggttacctgggaccacctcac
cagggtccacccatgcaccatgtccctggccatgacagccgtggcccacccccacatgag
atgaggggagggccattagctgagcccagacctctaatggcagagccaagaggacccatg
ctagatcagaggggtccacccttggatggcagaggcggaagagatccccgaggcatagac
acacgaggaatggaggcacgagccatggaggctagaggattagatgccagaggattggag
gcccgagcaatggaggctcgtgcgatggaggcccgtgcgatggaggcccgcgcgatggag
gcccgcgcgatggaggcccgcgcgatggaagtcagagggatagaggccagaagtatggat
acaaggggcccggtccctggccctagaggccctatgcctactggaatccagggtcccagt
ccaattaacatgggggcagttggcccccagggatccagacaggttcggaaactgagatcc
aagaattcaggtgacttgtccaaattcacacaactgaaaagtggcagagcaaggaataga
acccactgtttttttcagtgtaccactcagtcctgttatctgcacatcatgtatgtgtat
atgtgtatctgcctcccgttctttaataggaaatacgaatatgttgttttctggtgtgta
aaagaaaactattctctttttttcaaattgtgctttttaaaaatgtgtctgggggccttg
atgtttattctgccctctaggatcagtagccttaaaatagaaacagtttttattcattta
cttactcagtcagcaaatatttattga
DBGET
integrated database retrieval system
