Lutra lutra (Eurasian river otter): 125094640
Help
Entry
125094640 CDS
T08100
Name
(RefSeq) single-minded homolog 2
KO
K09100
single-minded
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125094640
Transcription factors [BR:
llv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125094640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
125094640
NCBI-ProteinID:
XP_047575986
LinkDB
All DBs
Position
1:complement(8525934..8579103)
Genome browser
AA seq
678 aa
AA seq
DB search
MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
GDAWGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPSDHDEMTAVLAAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGY
KVIHCSGYLKIRQYVLDMSLYDSCYQIVGLVAVGQSLPPSAVTEIKLHSNMFMFRASLDL
KLIFLDSRVTELTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSK
LGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLDQVSTSKCQDSWRTAL
STSQETRKLAKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECSQLGNWRASPPANALAPPE
QQLHSESSDLLYAPSYSLPFSYHYGHFPLDSHVFSSKKPMLPAKFGQPQGSPCEVARFFL
STLPASGECQWHYANPLVPSSPTPAKSLSEPPVNTARHSLVPNYEAPAAAAARKFGEDTA
PPPPPPPPPPPPPSFPSCGHYREEPALGPAKAARQAARDGARLALARAAPDCCAPPAPEP
PGAPAQLPFVLLNYHRVLARRGPLGGAAPGAPALACGGAPETAAGALRPRPPGPAAASPP
GAPLPHYLGASVIITNGR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaagtccaagaatgcggcgaagaccaggagggagaaggaaaatggcgagttt
tatgagctggccaagctgctcccgctgccgtcggccatcacctcgcagctggacaaggcg
tctatcatccgactcaccaccagctacttgaagatgcgggccgtcttccccgaaggttta
ggagacgcgtggggacagccaagccgcgccgggcccctggacagcgtcgccaaggagctg
ggatcgcacttgcttcagactttggatggatttgttttcgtggtagcatctgatggcaaa
atcatgtatatatcggaaacagcttctgtgcatttgggcttgtcgcaggtggagctcacc
ggcaacagcatctatgaatacatccatccttccgaccacgacgagatgacagctgtccta
gcagcccaccagccccttcaccatcacctgctccaagagtatgagatagagaggtctttc
ttcctgcggatgaagtgtgtcttggcgaaaagaaacgcgggcctgacatgcagtggatac
aaggtcatccactgcagtggctacttgaagatcaggcagtatgtgctggacatgtccctg
tacgactcttgctaccagatcgtggggctggtggccgtgggccagtcgctgccgcccagc
gccgtcacagagatcaagctgcacagtaacatgttcatgttcagggccagcctcgacctg
aagctgatcttcctggattccagggtgaccgagctgaccgggtatgagccgcaggacctg
atcgagaagaccctctaccatcacgtgcacggctgtgacgtcttccacctccgctacgcg
caccacctcctgctggtgaagggccaggtcaccaccaagtactaccggctgctgtccaag
ctgggcggctgggtgtgggtgcagagctacgccaccgtcgtgcacaacagccgctcgtcc
cggccgcactgcatcgtgagtgtcaattatgtcctcacggagatcgaatacaaggaactg
cagctgtccctggaccaggtgtccacgtccaagtgccaggactcctggaggactgccttg
tctacctcacaagaaactaggaaattagctaaacccaaaaacacgaagatgaagacaaag
ctgagaacaaacccttaccccccacagcaatacagctcgttccaaatggacaaactggaa
tgcagccagctgggaaactggagagccagccccccggcgaacgccctggcacccccagaa
cagcagctccattcagaaagcagtgaccttttgtacgccccgtcctacagcctgcccttc
tcctatcattatggacacttccctctggactctcacgtctttagcagcaaaaagccaatg
ttgccggccaaatttgggcagccccaaggatccccgtgtgaggtggcacgctttttcctg
agcaccctgccagccagtggtgaatgccagtggcattacgccaaccccctagtgcctagc
agcccgactccagctaaaagcctttctgagccgccagtgaacactgctcggcacagcctt
gtgccaaactacgaagcgcccgccgccgccgccgcgcgcaagttcggcgaggacaccgcg
ccgccgccgccgccgccaccgccgccgccgccgccgccgagcttcccgagctgcggccat
taccgcgaggagcccgcgctgggcccggccaaggccgcccgccaggccgcccgggacggg
gcgcggctggcgctggcccgcgcggcgccggactgctgcgcgccgccggcccccgagccc
ccgggcgcgcctgcgcagctgcccttcgtgctgctcaactaccaccgcgtgctggcccgg
cgcgggccgctggggggcgctgcgcccggcgcgcccgctctggcctgcggcggcgccccc
gagaccgcggccggcgcgctgcggccccggccccccggccccgccgccgcctcgccgccc
ggcgcgccgctgccgcactacctgggcgcctcggtcatcatcaccaacggcaggtga
DBGET
integrated database retrieval system
