Lutra lutra (Eurasian river otter): 125099220
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Entry
125099220 CDS
T08100
Name
(RefSeq) ATP-dependent DNA helicase Q4-like
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125099220
03400 DNA repair and recombination proteins [BR:
llv03400
]
125099220
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125099220
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125099220
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125099220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
zf-CCHC_2
zf-CCHC_3
ResIII
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
125099220
NCBI-ProteinID:
XP_047584588
LinkDB
All DBs
Position
4:354488..363481
Genome browser
AA seq
1473 aa
AA seq
DB search
MQVRATAAVQSHMLMVPGSCSTPSSRRPVMSSTRRACFLGARGTSLHHHRNAAPAQGLRA
PQQGPAAVGTFLQQLLEAEQREGPCVHQLAKHNSLLVHEGHLEQQGEELSRQQGQGLAGS
WLALEHLPCAQEHKGSSLAPEAPRFPTSCTTRVLRALVLEAPGTPTPGLALPGDKRREDD
SYLAVTGPSDQHLPREEARAASVVTVGGASVQGPPPPPARPAPPGVSPKTPPPGSSQPRA
AGDPRGDALRLPDAICPSKPEDVEAAPEETRALYREYRVLKGALGGAGGVGPRNPEQSLP
AAAQEVPEPSCWGPHLNRAAAQSPPAPPRGTSTVGSVPDYGKRLKANLKATLQAGPVLGH
IPRPPRRPSSKMPSPGPPGTGAAPVSPEEVSEVPLQPRGPRLRPGCLQQLQASLSLRLCS
LDPDWLQRCQNGAPDFLGASEACQPNLSVEDSQPLASGVPPVLGPGAGPETQALQTARVR
AESPQPGNRQGKKWTWNREPEGSPTQAQQDSGHAGPLPEEAGAPEHAEACPGEPVGAQPP
SGPTAPRPAVQSGGNYVRLNMKQKRYVRGPALRGRLLRKQMWKQKWQKKRECFGGAQPRA
TVKNFCFRCGQLGHWSSRCPQSSETSTLEPALGPQKSGDNEDDVQTQLVADEAVQRTGTA
GCQQPVSEIDTEPAGPELLVTVQPVPQAHCQHHPVPPLYPPGPSGQVAETPAEVFQALEQ
LGHQAFRPGQERVIMQILSGMSTLLVSPTGAGKSLCYQLPALLYARRSPCLTLVVSPLLS
LMDDQVSGLPPCLKVACIHSGMTRKQRESVLKKVQAAQVHVLMLSPEALVGAGLGTSGCL
PQLPPVAFACVDEAHCLSQWSHNFRPCYLRVCKVLREHLGVRCFLGLTATATRSTSRDVA
QHLGVAEELVLREPVTVPANLYLSVSMDIDPEQALVTLLQSDRFRALSSIIIYCNRRQDT
ERVAALLRTCLHVSQDLGPRGQVPEAIAKAYHAGMCHRERRQVQQAFMDGRLRVVVATVA
FGMGLDRPDVRAVLHLGLPASLETYVQAVGRAGRDGQPAHCHLFLQPQGQDLQELRRRVH
ADAADFLAVKKLVQCVFPPCTCAPAQRPPEKDGAGSQKTPVAGSLREAEQPSSQRAARCP
GHQRALPVQPLVQALDMPEEAIETLLCYLELHPRCWLELLAPTYARCHLRCPGGAPQLLA
LAHRCPLLAVCLAQQPPENTGGGGCSVEFDVVKLADSAGWKLASAQRALRQLQWEPEPTT
GAPSPRPTRPRTCLPPTCPHVMSSLAGARRDTGVQVEFRELAFCLRSPGDLTAPERDQIC
DFLYGHIQAREREALASLRRTFWAFHSVAFPSCGPCLEQPSEERSTRLKALLSCYFKEEG
PGDTEDDQDPEPGQAGIQDWEDQVRRDVRHLLSSWPEQQFSGRAVARIFHGIGSPRFPAQ
VYGRDRRFWRRHLCLSFPALMRLATEEILRWGR
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcgggccaccgctgctgtgcagtcccacatgctcatggtaccagggtcctgc
tccacaccgtcgtccaggaggcccgtcatgtccagcactcgcagggcatgcttcctggga
gcacgggggacctctctgcaccaccaccgcaacgccgccccagcccagggcctgagggcc
cctcagcaaggcccggctgcagtgggcacattcctgcaacagctgctggaagctgagcag
cgggaagggccatgtgtgcaccagctcgcgaagcacaacagtcttcttgtccatgaaggc
caccttgaacagcagggggaagagctctcgaggcagcaggggcagggcctggcaggcagc
tggctggcactggagcacctgccgtgtgctcaggaacacaaggggagcagtctggctcca
gaggccccgcgcttcccaacctcatgcacaacgcgagtcctcagggcactggttctggag
gcgcccggaacgccaacccccggccttgcgctgcctggagacaaacgtcgcgaggacgac
tcatacctcgctgtgacaggaccgagcgaccagcacctgccacgagaggaagcgagagca
gccagtgtggtcaccgtgggaggagcctccgtgcaggggccgccgccccctcccgcgcgg
cccgcgcctcccggcgtctccccgaagacgcccccgcctgggtcctcccagcctcgagcc
gcgggagaccctcgaggcgacgccctccgcctccccgacgcgatctgcccctcgaagccg
gaggacgtggaggcggcgccggaggagacccgcgcgctctaccgagagtaccgcgtcctg
aagggggccctgggcggggccggcggcgtgggacctcgcaaccccgagcagtcgcttccc
gccgcggcgcaggaggtgccggagcccagctgctgggggccgcacttgaatcgggctgcg
gcccagagtccacccgctcctccccgtgggacaagtactgtggggtctgtgcccgactac
gggaagaggctcaaggccaacctgaaggccactctgcaggctgggccagtcctgggccac
ataccccgacctccacgaagaccctcgtccaagatgccctccccagggccaccgggcaca
ggggctgcccccgtctctccagaagaagtcagtgaggtccccctccagcctcgtgggcct
cggctgaggccaggctgcctccagcagctacaggcatccctgagcctacgactgtgctct
ctagaccctgactggctacagcggtgtcaaaacggggccccagatttcctgggggcttct
gaggcctgccagcctaacctgagtgtagaggactcacaacctctggcttcaggtgtcccg
cctgtccttggtcccggcgctggccctgagactcaagccctacagacagccagagtccgt
gcagagagcccccaacctggcaacagacaaggcaagaagtggacatggaatagggaacca
gaagggagtcctacgcaggcccagcaggacagcggtcacgcgggacctctgcctgaggaa
gctggggctccagaacacgcagaagcctgcccaggagaacccgtgggggcacagcccccc
agtggccccacagcccccaggccagctgtccagagcggaggtaattacgtgcggctcaac
atgaagcagaaacgctacgttcggggcccggcgctccgtggcaggctgctccgaaagcag
atgtggaagcagaagtggcagaagaagagggagtgttttgggggtgctcagcccagagcc
acagtcaagaatttttgcttccggtgtggacagctaggccactggtcatcccggtgcccc
cagtcaagtgaaacttctactctggagcctgctctgggtccccagaagagcggtgacaat
gaagacgacgtgcagacccagctcgtcgcggacgaagcagtgcagaggacaggcactgcc
ggctgccagcaacctgtgagtgagatagacacggagcctgctgggcctgagctgctggtg
actgtgcagcctgtgccccaggcacactgccagcaccaccccgtgccaccactctaccca
ccggggccctcgggacaagtggcagagacaccggctgaagtgttccaggccctagagcag
ctggggcaccaagccttccgccctgggcaggagcgtgtgatcatgcagatcctttctggc
atgtccacgctgctggtgtcgcccactggtgccggcaagtccctgtgctatcagcttccc
gcgctgctttacgcccggcggagcccctgcctcacactggtcgtctctcccctcctgtct
ctcatggatgaccaggtgtctggcttgcccccgtgcctgaaggtggcctgcatccattca
ggcatgaccaggaagcagcgtgagtctgtcctgaagaaggttcaggcagcacaggtgcac
gtgctgatgctgtcgccagaggcgctggttggggctgggttggggacctctggctgcctc
cctcagctgcctccggtcgcttttgcctgtgtcgatgaggcccactgcctttcccagtgg
tcccacaacttccggccctgctacctgcgtgtctgcaaggtgctgcgggaacacctgggt
gtgcgctgcttcctgggtctcacggccacggccacacgcagcacctcgagagatgtggcc
cagcatctaggcgtggccgaggagcttgtcctccgtgagccggtcactgtccctgccaac
ctgtacctctctgtgtccatggacatagacccagagcaggctttggtgacattgctgcag
agtgaccgctttcgtgctctgagctccatcatcatctattgcaacagacgccaggacaca
gagcgtgtcgccgcactgctccgcacctgcctgcatgtgtcccaggacctggggcccaga
ggccaggtccctgaggccatagccaaagcctaccacgccggcatgtgtcaccgggagcgg
cggcaggtgcagcaggccttcatggacggcaggctgcgggtggtggtggccacggtggcc
tttgggatggggctggaccggccggacgtgcgggctgtgctgcacctggggctgcccgcg
agcttggagacctacgtgcaggctgtgggccgggctgggcgtgacggccagcctgcgcac
tgccacctcttcctacaaccccagggccaggacctgcaggagctacggagacgcgtgcac
gccgatgcagccgactttctcgccgtgaagaaactggtccagtgcgtgtttcccccctgc
acctgtgccccagcccaacggcctccagagaaggacggagccggaagccagaagacacct
gtggccgggtccctgagggaggctgagcagcccagcagccagcgtgcagcccggtgccca
ggccaccagcgggcacttccggtgcagccgctggtgcaggccctggacatgcccgaggag
gccattgagaccctgctgtgctacttggagctacacccacgatgttggctggagctgctg
gcacccacctacgcccggtgccacctgcgctgccctgggggtgccccccagctcctggct
ctggcccacaggtgtcccctcctggctgtatgtttggcccagcagccgccggagaacaca
ggtgggggaggctgttctgtagagtttgacgttgtgaagctggcggactcggcgggctgg
aagctggcgtcagcacagcgggctctccgtcagctgcagtgggagcccgagcccacgaca
ggtgcgccctccccccggcccactcggccccggacctgcttgccgcccacctgcccgcat
gtgatgagctctctggcaggtgcacgtcgggacacgggggtgcaggtggagttccgggag
ctcgccttctgtctgcgcagtcctggagacctgacagcccccgagagggaccagatctgt
gacttcctgtacggccacatacaagcccgagagcgggaggccctggccagcctgcgccgc
accttctgggcctttcacagcgtggccttccccagctgcgggccctgcttggagcagccc
agtgaagagcgcagcaccaggctcaaggccctgctcagctgctacttcaaggaagagggt
cccggggacacggaagacgatcaggacccggagccaggacaggcagggatccaggactgg
gaggaccaggttcgccgggacgtgcgccaccttctgtcctcgtggccagagcagcagttc
tcaggcagggctgtagcccgcatcttccacggcatcggaagcccccgcttcccagcgcag
gtgtatgggcgggaccggcgcttctggaggagacacctgtgcctgagcttccccgccctg
atgcgcttggccacagaggagatcctgcgctggggccgctga
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