Lutra lutra (Eurasian river otter): 125108644
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Entry
125108644 CDS
T08100
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03250
Viral life cycle - HIV-1
llv04623
Cytosolic DNA-sensing pathway
llv05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125108644
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125108644
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125108644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llv03400
]
125108644
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125108644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
SAM_PNT
PDEase_I
Motif
Other DBs
NCBI-GeneID:
125108644
NCBI-ProteinID:
XP_047600720
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Position
9:complement(121950779..122009164)
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AA seq
626 aa
AA seq
DB search
MQGADSEQPFKRPRCDGSPRTPPNNRSAAAERSPDPELLPDPRFWGPEQVCRFLERSGFS
DPRLLDRFRESKITGLALLHLNESDLESLGISALGDRKKLHNYIQQLSGIYGDSMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHEQGSVMM
FEHLVNSNGLKAAMKYYGLVPEEDICFIKEQIVGPLESPIKDSSWPYKGRPKEKSFLYEI
VANKRTGIDVDKWDYFARDCHHLGFQNNFDYKRFIKFARVCEVENGKRICPRDKEVGNLY
DMFHIRNSLHRRAYQHKIGNIIDTMITSAFLKADPYMEITGAEGKKYHISTAIDDMEAFT
KLTDNIFLEILYSSDPKLDEAREILKKIEYRHLYKYVGETKPKGKIKIKREDYQYLPKEI
ADAKPDVLLESELKAEDLIVDVINMDYGMEDQNPIDHVRFYSKHDLSKAVRITKDQVSEL
LPERFAEQLIRAYCKKTDTKSVHAAHQHFVQWCLIRDFTKPQDGDIIAPLITPRKLEWNN
TNSAESPDHLREVSRSRHCLFPDDSV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagccgactcggaacagcccttcaagcggccccgatgcgatggcagcccaaga
acccctccaaacaaccgttccgcggcggcggagaggtccccggaccccgaactcctccca
gatccccggttctggggcccggagcaggtgtgccgcttcctagagcgcagtggcttcagt
gatccccgactactggaccgcttccgagaaagtaaaatcacaggtttggcactgctccat
cttaatgagtctgatcttgaaagtcttgggataagtgccttgggggacagaaagaagctg
cacaattatatccaacaactgagtgggatttatggtgattcaatgaaggtaattaatgat
cctatccatggccacattgaactccaccctctcctcatccgaatcattgacacacctcaa
tttcagcggcttcgatatatcaaacagttgggaggcagttactacatttttccaggtgct
tcgcacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgt
gcactgcgggagaaacaaccagagctgcagataagtgaacgggatgtgctctgtgttcag
attgctggcctttgtcatgatctcggtcatgggccattttcacatatgtttgatggaaga
tttattccacttgctcgcccagatgtgaaatggacgcatgaacagggctcagtgatgatg
tttgagcacctcgttaattctaatggactcaaagcagccatgaaatactacggtcttgtc
cctgaagaagacatttgctttatcaaggaacaaattgtaggaccacttgaatcaccaatc
aaagattcttcgtggccatataaagggcgtcctaaagagaaaagcttcctttatgagata
gtggccaataaaagaactggcatcgatgtggacaaatgggattattttgccagggactgc
catcatcttggattccaaaataattttgactacaagcgctttattaaatttgcccgtgtc
tgtgaagtagagaatgggaagcgtatttgtcctagagataaggaggttgggaatctatat
gacatgttccatattcgcaactctttgcaccgcagagcttatcaacacaaaattggcaac
atcattgatacaatgattacaagtgctttcctcaaagcagacccctacatggagattaca
ggtgctgaaggaaaaaagtatcacatctctacagcaattgatgacatggaagccttcaca
aagctaacagataacatttttctggagattttatattcttctgatcccaaactggatgaa
gcacgagagattttaaaaaaaattgaataccgtcatctatacaagtatgtgggtgagact
aagccaaagggaaaaataaaaattaaaagggaagactatcaataccttccaaaggaaatt
gctgatgctaaacccgacgtattgctggaatctgaactgaaggctgaagatttaatagtg
gatgttatcaacatggattatggaatggaagaccagaatcctatcgatcatgttcgcttc
tattctaagcatgacctcagcaaagcagtcaggattactaaagatcaggtttcggagctt
ttgccagagagatttgcagagcagctaattcgcgcatactgtaagaagactgacacaaag
agcgtgcatgctgcgcaccagcatttcgttcagtggtgcttgatcagagacttcaccaag
ccgcaggatggtgatattatagccccacttataacacctcggaaactggaatggaataac
acgaattcagccgagagcccagatcacttgcgggaagtgtccagatctagacattgtctt
tttccagatgactcagtgtga
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