Lutra lutra (Eurasian river otter): 125109979
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Entry
125109979 CDS
T08100
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125109979
Membrane trafficking [BR:
llv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125109979
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
125109979
NCBI-ProteinID:
XP_047603059
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Position
1:186684428..186719033
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AA seq
1090 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAETIPYGEPGISTPVSGGWDSS
TWGLKSNTEPQSQPVASPKAITKPVRRTVVDESENFFSAFLSPTDVQTIQKSPVVSKPPA
KSQRPEEEVKSTLQESLHTGQSRTSETTESKVKDSTPSASGETPAVDALSPKTEGKHEET
VNKESDMKVSTVRLKVSESVSNVKTTRENISNMSAADTKDMALEPKEQKHEDRQSNTPSP
PVSTFSSGTSTTSDIEVLDHESVISESSASSRQETTDSKSSLHLMQTSFQLLSASACPEY
NRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELSGKGYALVPIIVNPST
PKTKINESVEGKSEEAVNETLIVPAEETEMEESGRSATPVNCEQPDILVSATPINEGHTL
SNKVAEECEAAESMPEAHSEKEDVCKRVEFLNEKLDKREAQLLSLSKEKALLEEAYDNLK
DEMFRVKEESSSITSLKDEFTQRIAEAEKKVQLACKERDAAKKEIKSMKEELATRLNSSE
TSDLLKEKDEQIRGLMEEGEKLSKQQLHNSNIIKKFRAKDKENENIIAKLNKKVKDLEED
LQHLKQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRFQVDMDELEEKNRSIQAALDSA
YKELTDLHKANAAKDSEAQEAALSREMKAKEELSTALEKAQEEARQQQETLAIQVGDLRL
ALQRAEQAAARKEDYLRHEIGELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQATLG
SQTSSWEKLEKNLSDRLGESQTLLAAAVERERAAAEELLANKIQMSSMESQNSLLRQENS
RFQAQLESEKNKLRKLEDENNRYQVELENLKDEYVRTLEETRKEKILLNSQLEMEKMKVE
QERKKAVFNQEAIKEKERKPFSVSSTPTMSRSSSISGVDMAGLQTSFLSQDEPHDHSFGP
LSVSANGNNLYDAVRMGAGSSIIENLQSQLKLREGEITHLQLEIGNLEKTRAIMAEELVK
LTNQNDELEEKVKEIPKLRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKTQ
IDELLRQRLS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcctcccagctctccagcttcgcgaagcaggccctgtcccaggcc
cagaagtccatcgacagggtcctggatatccaggaagaggagccgagcgcctgggccgag
acgattccgtacggggagccaggaataagtactcctgtcagtggaggatgggattcttca
acctgggggttaaagtcaaacactgaacctcagagtcagcctgtagcctctcctaaagca
attacaaagccagttcggagaactgtggtggatgaatctgaaaatttcttcagtgccttt
ctctctccaacggatgttcagaccattcagaagagtccagtggtgtcaaaaccaccagct
aaatcacaacgaccagaagaagaagtgaagagcactttacaggaatccttgcacactgga
cagtcaaggacatctgaaacaactgagtcaaaagtaaaagattctaccccatctgcatca
ggggaaactccagcagtagatgctctgtcgcctaaaactgagggcaagcatgaagaaact
gttaataaagaatctgatatgaaggtgtcaactgtacgtttgaaagtatcggaaagtgta
agcaatgtgaaaacaactagagaaaacatatctaatatgtctgcagcagacacgaaggac
atggctttggaacctaaggaacaaaaacatgaggacagacagagtaacacaccgtcacct
cctgttagcaccttctcgtccggtacttctaccaccagtgacattgaagttttagatcat
gaaagtgtaataagtgagagctcagcaagttcgagacaagagactacagattccaaatca
agtcttcacttgatgcagacatcttttcagcttctctcggcatctgcctgtcccgaatat
aatcgtttagatgatttccaaaaactcactgagagttgctgctcatctgatgcttttgaa
agaatagactcgtttagtgtacagtcattagatagccgtagtgtaagtgaaatcaattca
gatgatgaactgtcaggcaagggatatgctttagtacctattatagttaatccttcaact
cccaaaactaaaataaatgaatctgttgaaggaaaatcggaagaagcagtgaatgaaaca
ttaattgtacccgcggaggaaacggaaatggaagaaagtggacgaagtgcaacacctgtt
aattgtgaacagcctgatattttggtttctgctacaccaataaatgaaggacatactctc
tcaaacaaggtggctgaggagtgtgaagctgctgaaagtatgccggaagcgcattctgaa
aaggaagatgtttgcaagagagttgaatttctgaatgagaaactggataaaagggaggct
cagttattatctcttagtaaagaaaaagcacttctagaagaagcctatgataatctgaaa
gatgaaatgtttagagtgaaagaagaaagcagcagcattacttccttgaaagatgaattt
actcaaagaattgcagaagcagaaaagaaagttcagctagcctgcaaagagagagatgct
gctaaaaaggaaattaaaagtatgaaggaagaacttgctactagattaaatagtagtgag
acttcagatcttttgaaagagaaagatgagcagatccgaggattaatggaagaaggagaa
aaactttcaaaacagcaactgcataattctaacattattaagaaattcagagctaaagac
aaagaaaatgaaaatattattgcaaagctgaacaaaaaagttaaagacctagaagaagat
ttgcaacatttaaaacaggtccttgatggcaaagaagaagttgagaaacaacatagagaa
aacattaagaaactaaattctgtggtggaacgccaagagaaggatcttggccgatttcag
gtagacatggatgaacttgaggaaaagaaccgaagtattcaggctgctctggatagtgca
tacaaagaacttactgatctccacaaagccaatgctgcaaaggatagtgaagcccaggaa
gctgctctaagtcgtgaaatgaaagctaaagaagaactttctactgcgctagagaaggcc
caagaagaagcccgtcagcagcaagaaacattagcaattcaagttggagaccttcgactg
gccctgcaacgcgcagagcaggccgctgccagaaaagaggattatttacgccatgagatc
ggtgaactccagcagagactccaggaagcagagaatcgaaaccaagagctgagtcaaagt
gtttcatcaacaacaagaccgttgcttcgacagatagaaaatttgcaagcaactctgggg
tcccagacatcatcgtgggagaagttagagaagaatctttctgatagacttggtgaatcc
cagactttgttagcagcagcagttgaaagagaacgtgcagctgcagaagaactccttgcc
aacaaaattcagatgtcctccatggagtcacagaattctctcttaagacaggaaaacagt
agatttcaggcccagttagaatcagagaaaaataagctaagaaaacttgaggatgaaaat
aataggtaccaggttgaattagaaaatctaaaagatgaatacgtaagaacacttgaagag
acaaggaaagaaaagatactactgaatagtcagttagaaatggagaaaatgaaagttgaa
caggaaaggaagaaagctgttttcaaccaagaagcaataaaagaaaaggaacggaagcca
ttttctgtttctagcactcctaccatgtcacgttcgagttcaataagtggagttgatatg
gcagggctacaaacatcttttctgtctcaggacgagcctcatgatcactccttcggaccc
ctgtctgtgtcagctaatggaaacaatctttatgatgctgtgagaatgggagcaggatcc
agcattattgaaaatctgcagtctcagctgaaactcagggaaggagagattactcattta
cagctagaaattggcaacctagagaaaacacgcgcaataatggctgaagagctagttaaa
ttaacaaatcaaaatgatgaactcgaagagaaagtgaaagagatacccaaacttcgaact
cagctaagagatttggatcaaaggtacaacactattctgcagatgtatggagaaaaagca
gaagaggcagaagaacttcgattagatcttgaagatgtaaaaaatatgtataagactcaa
atagatgaacttttaagacaaaggctcagttaa
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