Leishmania major: LMJF_07_0340
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Entry
LMJF_07_0340 CDS
T01014
Name
(RefSeq) putative ATP-dependent DEAD/H RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lma
Leishmania major
Pathway
lma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMJF_07_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lma03041
]
LMJF_07_0340
03009 Ribosome biogenesis [BR:
lma03009
]
LMJF_07_0340
Enzymes [BR:
lma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMJF_07_0340
Spliceosome [BR:
lma03041
]
Complex A
U1 snRNP components
U1 related factors
LMJF_07_0340
Complex B
LMJF_07_0340
Ribosome biogenesis [BR:
lma03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMJF_07_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
CMS1
GOLGA2L5
Motif
Other DBs
NCBI-GeneID:
5649191
NCBI-ProteinID:
XP_001680939
UniProt:
Q4QIQ9
LinkDB
All DBs
Position
7:complement(join(152464..152804,157260..158697))
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AA seq
592 aa
AA seq
DB search
MSDYGDAQHNGGDSGARGEGGYGGGRDGGYDGGRNGGYGGGRDGGYGGGYGGGRGGDRYR
SGGGYGGGRGYGGGYGGGRGGDRYHDRHGGLGSNLHRIDWDAVQKVATQWNFYKPQKPRS
EEEIATWLRENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQKPTPIQSVSWPVLL
NSRDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRK
ALTRVPSIMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLD
EADRMLDMGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELV
ANADVHQHVFVVEGYHKEEKMEEILRQVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLA
IHGDKLQSSRDYVLDRFRKDERAILVATDVAARGLDIKDLDVVVNYDMPLNIEDYVHRIG
RTGRAGKTGDAYSFVSSADNSKTIRDLIDLLLRAKQEVSPELYAVCQYARSDGGRGGRGY
GGGGYRGGRGYGGGGYRGGRGYGGGGYRGGRGYGGPGGVPGGPPRSESFTPY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggtgacgctcagcacaacggcggcgacagcggtgcccgcggcgagggc
ggctacggcggtggccgtgacggcggctacgatggcggtcgtaacggcggctatggcggt
ggtcgtgacggtggctacggtggcggctatggcggcggtcgcggcggggatcgctaccgc
agcggcggcggctacggtggtggtcgtggctacggtggcggctacggcggcggccgcggc
ggagatcgctaccatgaccgccacggcggcctgggttccaacctgcaccggatcgactgg
gacgccgtgcagaaggtggcgacgcaatggaacttttacaagcctcagaagccgcgcagc
gaggaggagattgcgacgtggcttcgcgagaacagcatcaccatctacggcgaccgcgtg
ccgcagccgatgctcgaattttccgacctggtcgccccagatgccattcatcaggctttc
atggacgccggattccagaagccgaccccgattcagtccgtctcctggccggtcctgttg
aactcgcgtgacattgtcggcgtggccaagacgggctctggcaagacgatggccttcatg
attcccgcggccctgcacattatggcgcagcctccgctgcagcctggcgacggtcctatc
gccctcgtcctcgccccgacccgcgagctggcggtgcagatcgagacagagacacgcaag
gctttgacgcgcgtgccgagcattatgacgacgtgcgtgtatggtggcactccgaagggg
ccgcagcagcgcgccctgcgcgccggtgtgcacgtctgcattgcaacgccaggtcgcctg
attgacctgctggagacgaactgcacgaatctgctgcgtgtcacctacctcaccctcgac
gaggcggatcgcatgcttgatatgggtttcgaagaccaaatccgcaagatctgctctcag
attcgcacagaccgccagacgctcatgttctcggcgacgtggccgcgcgagatccgaaac
ctcgccgccagcttccagaaggactttgtacgtgtccacatcggctccgaggagctggtg
gccaacgctgatgtccaccagcacgtcttcgtcgttgagggatatcacaaggaggagaag
atggaggagattcttcgccaggtcggaccgcagcgcgtactcgtctttgtgaagacaaag
aagtcgtgcgacattttgcaggaccgccttggccgcgcgctgcggcagacggtgctcgct
attcacggtgacaagctgcagtccagccgcgactacgtgctggaccgcttccgaaaagac
gagcgcgcgatcctcgtcgccaccgacgtggcagcgcgcggtctcgatatcaaggacttg
gacgtggtggtgaactacgatatgccactgaacatcgaagattatgtgcatcgtattggt
cgtacgggtcgtgccggtaagaccggcgacgcctattcctttgtttcatcggctgataac
agcaagaccattcgtgacctgatcgacctgctgctgcgcgcgaagcaggaggtctcgccg
gagctctacgccgtctgccagtacgcgcgcagcgatggcggccgcggcggacgtgggtac
ggcggtggtggctaccgtggcggccgtgggtacggcggtggtggctaccgtggcggccgt
ggttacggtggtggtggctaccgcggtggtcgcggctacggcgggcccggtggtgtccct
ggtggtcccccgcgcagcgagagcttcacaccgtactag
DBGET
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