Leishmania mexicana: LMXM_05_0140
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Entry
LMXM_05_0140 CDS
T02288
Name
(RefSeq) putative nucleolar RNA helicase II
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_05_0140
03036 Chromosome and associated proteins [BR:
lmi03036
]
LMXM_05_0140
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_05_0140
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_05_0140
Chromosome and associated proteins [BR:
lmi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
LMXM_05_0140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ERCC3_RAD25_C
Hera_DD
ResIII
DUF601
Motif
Other DBs
NCBI-GeneID:
13452991
NCBI-ProteinID:
XP_003871902
UniProt:
E9AKB8
LinkDB
All DBs
Position
5:41666..43720
Genome browser
AA seq
684 aa
AA seq
DB search
MPRRAREESGEEKPHRITKLASSSDDDEPVKAAKISAKASDHDNGVGAEKRKRPEGNSKV
AATSATTPAEEKDEEVPNNGCAATARPFSEFEMNPTVVKALQSRGIESMFPVQALTFNAI
MRSTDVLVQARTGSGKTLAFGIPIVERLLKLPSHLIRGRGPAAVIFCPTRELAIQVQDVL
CGISCGLVVTALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDE
ADHMLDIGFKDDIELLLSQVAEQNGSVGAEKPVHQTLLFSATVPEWVHTCSFIAKDKEFI
DMVGKEAVRTASTIKFYRRKCNFSEISSMLADLIKVYSGAHGRTLVFTNTKKDCHDLSIN
NTKLDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLPMVDLVIQCAPPTDI
DAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLPAPTREEILKAVARD
AAEDLARVERRATNLFMDQAAELLKDADPVEILASALAVMSGYTSNITTRGLITGTPGYV
TVQMTSDRPLPVPVYCSILRNNLGDDMFMRCRDITLLQDDPGCVFDVLEQFAERVMSTPM
RGITFQRIETLPPIIARELNSSRGGRGGVNYGSGRGGFNNGGGYSGWRGGFGGGGYGGGR
GGGRGGGRGGSRGGGRGGGFQRRY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgtgcgcgcgaggagagcggtgaggagaagccgcaccgcatcacgaagctc
gccagcagcagtgacgacgatgaaccggtgaaggcggcaaagatctcggccaaggcgtcg
gaccacgacaacggcgttggtgcagagaaacggaagcgcccggaggggaactccaaggtt
gctgccacttcggcgacaacaccggcggaggagaaggacgaggaggtgccaaacaacggc
tgcgccgccacagcacgcccgttttcggagttcgagatgaacccaaccgtcgtgaaggcg
ctgcagtcacgcggcatcgagtccatgtttcctgtgcaggctctcaccttcaacgccatc
atgaggagcacggacgtcctcgtgcaggcccgcaccggtagcggcaagacactcgcgttc
ggtatcccgatagtggagcgtctgctgaagctgccgagtcacctcatccgcggccgcggc
ccagctgccgtgatcttctgccctactcgcgagctggccatccaggtgcaggatgtgctt
tgcgggatcagctgtgggctcgttgtgacggccctgtacggcggtgtcgcctacgcgaat
caggagcgcgtgctgcgcagcggtgtcgacattgtggtggccacccccggccgcgcgaag
gactttctagagaagggcacgctgcattttgaccgcgttgtgatggcgtgcctggacgag
gcagaccacatgctggacatcggcttcaaggacgacattgagttgctgctctcgcaggtg
gccgagcagaacggctccgtcggcgctgagaagccagttcatcagacgctgctgttctcc
gcgacggtgccggagtgggtgcacacgtgctccttcatcgccaaggacaaggagttcatc
gacatggtcggcaaggaggctgtgcggacagcgagcacgatcaagttctaccgcagaaaa
tgcaacttcagcgagatctcctctatgctggctgacctcatcaaggtttacagcggcgcc
cacggccgcaccctcgtcttcaccaacacgaagaaggactgccacgacctgtctatcaac
aacaccaagctggactcgcagtgcctgcacggcgatatgcagcaggagcagcgcgagagt
accatgaagagcttccgcgacaacaagttcagcgtcctcatcgccaccgacgtggcggcc
cgcggtctcgacctgcctatggtggacttggttatccagtgcgccccaccgaccgacatc
gacgctttcatccaccgcgccggccgtacaggacgcgctggccggaagggtgtatgtgtg
ctgctctaccaaccgcgcgaggagtacgttgtcgagcgcatcgagcgccacgcgaagatg
aagtttgacgtcctgccggcccccacgcgtgaggagattctcaaggccgtcgcccgtgat
gccgctgaggatctggcgcgtgtcgagcgccgtgcaaccaacctcttcatggaccaggcg
gccgagctgctgaaggacgcggacccggtcgaaatcctggcctcggcgctcgccgtcatg
agcggctacacgtcgaacatcaccacgcgcggtctcattacgggcacgccagggtatgtg
acggtgcagatgacgtcggatcgaccgctgccggttccggtgtactgcagcatcctccga
aacaacctcggtgatgacatgttcatgcggtgccgcgacattacactgctgcaggacgac
ccgggctgcgtgtttgacgtgctggagcagtttgccgagcgtgtcatgagcacaccgatg
cgcggtatcaccttccagcggatcgagacccttcctccgatcatcgcgcgcgagctcaac
agcagccgcggcggtcgcggtggcgttaactacggaagcggtcggggcggcttcaataac
ggcggcggctacagcggttggcgtggtggctttggcggcggcggctacggtggaggtcgc
ggcggcggtcgtggcggcggtcgtggcggtagccgcggaggtggccgtgggggcggtttc
cagcgccgctactga
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integrated database retrieval system
