Leishmania mexicana: LMXM_24_1370
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Entry
LMXM_24_1370 CDS
T02288
Name
(RefSeq) putative histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03082
ATP-dependent chromatin remodeling
lmi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LMXM_24_1370
03083 Polycomb repressive complex
LMXM_24_1370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmi03036
]
LMXM_24_1370
Enzymes [BR:
lmi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LMXM_24_1370
Chromosome and associated proteins [BR:
lmi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
LMXM_24_1370
HDAC complexes
Sin3A-HDAC complex
LMXM_24_1370
BRAF-HDAC complex
LMXM_24_1370
REST complex
LMXM_24_1370
SHIP complex
LMXM_24_1370
MiDAC complex
LMXM_24_1370
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
LMXM_24_1370
Heterochromatin formation proteins
Other heterochromatin formation proteins
LMXM_24_1370
Chromatin remodeling factors
NuRD complex
LMXM_24_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
13448879
NCBI-ProteinID:
XP_003875952
UniProt:
E9AWY0
LinkDB
All DBs
Position
24:487592..489229
Genome browser
AA seq
545 aa
AA seq
DB search
MSSPEQLPALSAGGSPSSGGASSHHSPHEASLPFPASAITGDASAESPRASSVPPSSTAS
EESAATSPLERKPDAAASRPGRRKVVYFVDHSVTAIAYAEGHLMRPSRVRALHALVHSLG
LDSAEYMTVCHARPATAEEMGAFHRSAYLECLRQAPVICGNPLDEISLAFQKEFDVPFAS
QNGDCPLFPEVWALVSSQAGASLACAEALVRGDATVAMNWAGGMHHAAAAHASGFCFVND
IVLCIRRLLRHYQRVLYVDLDVHHGDGVEGAFYGNHRVMTLSLHQFGNGFFPGTGDYPTR
ETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVVQCGADTIAGDLIGRLCV
TTLAHTQCVADVLSLERPTVLLGGGGYHVFHTARCWAIHTATALGRTAAQLPLYIPRTDP
YYMDYRRECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCRSIQWQMRTARLVRQGFSR
TVQLCRQRRAALLRQFATQEAGRDSGIGVSASKRQRSANVTDRDAKEGGGGQSGLGVMVA
EEECT
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctccggagcagcttcccgcgctctcagcgggggggtcaccgtcgtcgggaggg
gcttcctcgcatcactcaccgcacgaagcatcgctcccgtttcccgcttcggcgattacc
ggcgacgcctctgcggagtctccgcgcgcgtcgtcggtgccaccgtcttcaacagcaagc
gaggagagcgcagcaacatcgccactggagcgaaagccagatgcagcggcgtcacgccct
gggagacggaaggtggtgtactttgtagatcactccgtcactgccatagcctatgcggag
ggtcatttgatgcggccgtctcgtgtgcgtgcgctgcacgcgcttgttcattccctgggc
ctcgacagtgcagaatacatgactgtgtgtcatgctcgtccggcgacggcggaggagatg
ggggcgtttcaccgcagcgcgtacttggaatgcctgcggcaggcacccgtgatttgcggg
aatccgctggacgagatatccctagcttttcagaaggaatttgacgtcccgttcgcgtct
cagaacggcgactgtcctctctttcctgaggtgtgggcgctggtgtccagccaagccggc
gcctcgcttgcctgtgcagaggcccttgtacgcggcgatgccacggtggcgatgaactgg
gcaggtggcatgcatcacgccgctgccgcccacgcaagcgggttctgctttgtgaatgac
attgtgttgtgcatccgccggctgctgcggcactaccagcgcgtcctctacgttgacctt
gacgtgcatcacggggacggcgtggagggggccttttacggcaatcaccgcgtgatgacg
ctctcgctgcaccagttcggcaacggcttcttccccggcaccggtgactacccgacgcgt
gagacggccgacagcttcgccatcaacgtcccgctgcccacgcgcacgggagacgccgcg
tacctcttgtcgttccgcactgcactgtccagcgtggttcagtgctttgatccggaggcg
atggtcgtgcaatgcggcgcggacaccatagcgggagacctcattgggcggctttgcgtg
actacattggcgcacacgcagtgtgtggcagatgtgctgtcgcttgagcgaccgacggta
ctgcttggtggagggggttatcacgtgtttcacacggcgcgctgctgggcgatccacacc
gccaccgcgctaggtcgcacagctgcgcagttgcccttgtacatcccgcgcacagacccc
tactatatggattaccggcgcgaatgcacaccgaagcgtccgacgctgcatgtgtttctc
gaccctgacgtcgatgatccgctgccgttgggggacagcttggcgttctggcgtcagctc
tgtcgcagcatccagtggcagatgcgcactgcccgccttgtgcggcaggggttttctcgt
acagtacagctttgccggcagcgaagggcagcgttgctgaggcagttcgctacgcaagag
gcagggagggactcgggtatcggtgtcagcgcctctaagcgccagcggtcagcaaatgta
acggaccgcgatgccaaggaggggggcggaggacagagtggtctcggcgtgatggttgcg
gaggaggagtgcacttag
DBGET
integrated database retrieval system