Listeria monocytogenes L99 (serotype 4a): lmo4a_1630
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Entry
lmo4a_1630 CDS
T01989
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lml
Listeria monocytogenes L99 (serotype 4a)
Pathway
lml03030
DNA replication
lml03430
Mismatch repair
lml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lmo4a_1630 (dnaE)
03430 Mismatch repair
lmo4a_1630 (dnaE)
03440 Homologous recombination
lmo4a_1630 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lml03032
]
lmo4a_1630 (dnaE)
03400 DNA repair and recombination proteins [BR:
lml03400
]
lmo4a_1630 (dnaE)
Enzymes [BR:
lml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lmo4a_1630 (dnaE)
DNA replication proteins [BR:
lml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lmo4a_1630 (dnaE)
DNA repair and recombination proteins [BR:
lml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lmo4a_1630 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
CAR84334
LinkDB
All DBs
Position
complement(1628820..1632107)
Genome browser
AA seq
1095 aa
AA seq
DB search
MLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIKPIIGMTVTIQGYL
NPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSSNLIAISPGAKGEI
ERLLMEENRDGALEAYANLVDIFGKESVYLSAQKENPRLFAKIETFSAEENVPVVATKNV
QYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQTDFEKQACFETGE
LADRCHVEIALDQHLLPRFPLTEGQNAPDVLRQTAYDGLKERDLLGAEYQERLEYELKVI
TEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDVDPIRYNLLFERFL
NPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAKAAIRDTARSFGLN
SVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVACQLEGLPRHISTHA
AGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLRNLSLLDRVLKSVN
YNRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLKPTSFEDVVAVDAL
YRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQIIQVANQMAGFSLGE
ADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSDASANQVYDMIVQFANYGFNRSHAAAY
SKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISMLAPSINHSNYYFQ
VENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHKMLSETVLEALVFS
GCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKMKPRYRKTAPISID
EKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAAYVHEVKSIRTKKG
ETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADTRNGELQLIINKAEDL
KEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAELKNIQVTPSNELQ
EALVELLGKENVVIK
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
ttgctttctagtacagcatcaatcgataagctaatcgctaaagcaaaagaataccattat
ccagccttagcaattacggataaaaatgtgctttacggagtagtcgagttttatcaaaag
tgtttagcggcggatataaaaccaattattgggatgacggtgacaattcaaggttactta
aatccaattaattcatatgagttgatattaattgcggaatcaaccgctggatatcacgag
ttattaaaaatcgcgagtgctattcaaacgcgcgaagaaggaccagaattgccacaaagc
tggttacgcgcttatagcagtaacttgattgcgatttcacctggtgccaaaggagaaatc
gaacgtcttctgatggaagagaatcgcgatggagcgctagaggcttacgcaaatttagtc
gatatttttggcaaagaatcggtttatttatctgcgcaaaaagaaaatccgcgccttttt
gcaaaaatagaaacattttctgcagaagaaaatgtgcctgttgttgcgacaaaaaatgta
caatatttagagccaaaagatgcacaagcaaaagaagttttaactgccattcgtgataat
cgaacggtcgattggacaacgttaccacttgctggaccaaattattttacctcacaagaa
gaaatggaacgtgattggcaaacggatttcgaaaaacaggcatgctttgaaactggtgaa
cttgcagaccgttgtcatgtcgaaattgctttggatcagcatttattacctagatttcca
ttaacggaaggacaaaatgcaccagatgttttgcgtcagacagcctatgatggcttaaaa
gaacgagatttactaggggcggaatatcaggaacgattagaatatgaattaaaagttatt
acggagatggggtttgccgattactttttaattgtttgggatgttattcgttattcgcgt
gaggcgggagttttaacggggccaggtcggggttctgcggctgggtcacttgtttcctat
gcactcagaattacggatgtagatccgattcgatacaatttgctatttgaacgtttttta
aacccagaacggattacgatgcccgatatcgatttggattttccagataatcgtcgtgat
gaagtgatttcgtatgtggtatctaaatacggagaagcgcatgtggcgcaaatcggcacg
tttgggacactggcggcaaaagcggcgattcgcgatactgcgaggagttttgggttaaat
tctgtattattatctgaatggtctaagttgattccaagtcagttaggtattacgttacaa
aaagcattacaagaaagtccacgtttagaaaaccatattaaaagctctaaagaaaatgaa
atgatttgggaagtagcttgtcaactggaaggcttgccacgtcatatttcaacgcacgca
gccggaatagttattagcgacaagccactcgttgaacaagttgcgctgcaattaggtagc
ggagatgcacgtttgacccagtttgctatgggagaattagagaaaatcggcttacttaaa
atggactttttaggacttagaaatcttagtttactcgaccgcgttttaaaatcggttaac
tataatagagaaacgccgttaaccttagcggatatctctttagaagataaaaaaacatta
aaactattccaaacaggcgacacgacaggtgtattccaatttgaatcggacgggattcga
cgcgtactccgaaaattaaaaccaacttcttttgaagatgtcgtggcggtggatgcgctt
taccgtccaggtccaatggaacaaattgatacatttatcgctagaaaacacgggaaagaa
aaaattcaatatcctcatccagatttagcgccgattttggaagtgacatacggcgttatc
gtttatcaagagcaaattattcaagtagcgaaccaaatggctggattttcacttggagaa
gcagatttattaagacgagcggtcagcaagaagaaagcagatgtcctaaacgaggagcga
attcactttgtggaaggtgctaagagtaaaggttattcagatgctagcgctaaccaagtg
tatgatatgattgttcaattcgcgaattacggtttcaaccgaagtcacgcagcggcttat
tcaaaaatcgcttttcaattagcttatttaaaagcgcattttccagctgcatttatgtcg
tcgcttcttagctctgtttttggcaatgacgacaaaatttcccagtacattaccgaagca
aaaaactatggcattagcatgttagcgccaagcatcaaccatagtaattactacttccaa
gtggagaatgaatcatctatccgctatagtttccgtgttattcgtaaagtcccgacgaaa
ttcattttagaaattattaacgaacgaaaaaaagcacctttccgagatttctttgatttt
tgtgaaagaatgccacataaaatgctctcagaaaccgttttagaagcactcgtattttct
ggttgttttgacgaatttggtgaagaccgagcgacgattttggcaactattgatgcagtg
ctacaatatatttcgctactcggtgaagactcgaaagggatgaatcttttcgcggaagat
gatgactttttgaaaaagatgaaaccacgctaccggaaaaccgcgcccatttcgattgat
gaaaagttggagaaagaaaaattatacactggtcaatatgtttcagcgcatccagtatcg
tattatcaaaacaaattacaaaaccttgcaatcacaagacttgcaaacctttcttctggc
aaaaattatcaagtagctgcctatgtacacgaagtaaaatcaattagaacaaaaaaaggc
gaaacgatgtgctttttaacaattagtgatgactccaaagaactgagtgcagtgatgttc
ccagaaagttaccgtaaattcgctaattttgcacaaaaaggggaaatcctctttttgcaa
gtgaaagcagatacgagaaacggggaactccagttaattattaataaagcagaagattta
aaagaaataaaagcccccgtacgattgttcctaaaattaacggaaccacagcaaatggaa
caaattaagccagttttaacgcgttataaaggcgacagtaaggtcattgtgcatcaagca
ataacgaaacaaactgctgagctgaaaaatattcaagtaacgccatcaaacgagttgcaa
gaagcgttagtagagctgcttggtaaagagaatgtagtcattaagtaa
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