Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1813
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Entry
LMOSLCC5850_1813 CDS
T02223
Name
(GenBank) RNA methyltransferase, TrmA/RumA/YefA-family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmoc
Listeria monocytogenes SLCC5850 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmoc03009
]
LMOSLCC5850_1813
Enzymes [BR:
lmoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LMOSLCC5850_1813
Ribosome biogenesis [BR:
lmoc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LMOSLCC5850_1813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
PrmA
Cons_hypoth95
Methyltransf_25
RrnaAD
MTS
Methyltransf_15
Methyltransf_32
Methyltransf_11
TPMT
DOT1
DUF2023
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
CBY52282
LinkDB
All DBs
Position
complement(1819861..1821222)
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AA seq
453 aa
AA seq
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MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPFFIPNTLPGEKVTAKIIKLNKNYGFAR
MENIETVSADRVEPPCAVYSKCGGCSLQHLSYDGQLEFKRNQVEETMKRIGKLNVEVPET
LGMENPWRYRNKSQVPVGFVNGKLAAGFYQKRSHAIIDMSTCLIHNEQGDFAVQKTREIL
AKYGTEPYDEQTGKGDIRHIMTRFARTTGQLMIVLVTTKERMPFKEEIVRDLVEQLELTS
IVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRFAISARSFYQVNPLQTEVLYQQAID
AAELTGEETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELANTTFET
GKAEEVIPSWYKAGIVADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMK
ILTDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcatcccttttaaaaaagaaccaatccattgaacttactattgaagatttaacg
catgacggcagtggggttggcaaaattgacggatacccatttttcattccaaatacgtta
cctggcgaaaaagtgacagcaaaaataataaaattaaataaaaattatggttttgctcgg
atggagaatattgaaactgttagtgcagatcgtgtagagcctccttgtgcggtttattcc
aaatgtggcggttgtagtttgcaacatttaagctacgatggccagcttgaattcaaacga
aatcaagtggaagaaacgatgaaacgcattggtaaactaaacgtagaagttcctgaaacg
ctaggtatggaaaacccgtggcgctaccgcaataaatcacaagtaccggtaggttttgtt
aatggtaagttagcagctggattttatcaaaaaagaagccatgccattattgatatgtcg
acctgtttaattcacaatgagcaaggtgattttgctgttcaaaaaacacgtgaaatccta
gctaaatacggaacagagccttatgatgaacaaacaggaaaaggcgatatccgccatatt
atgacaagatttgcgcgtacaactggacagttaatgattgtccttgtaacaacaaaagaa
cgtatgccttttaaagaagaaattgtacgtgatttggtcgaacaactagaattaacttct
atcgttcaaaatattaacccacataaaacgaatgtgatttttggagatcgtacaaaaaca
ctttggggaaaagatattattgaagacacgattcatggtattcgttttgcaatttcggct
cgttcattttatcaagtgaatccgctccaaacagaagttttgtatcaacaagcaatcgac
gcggctgagttaacaggtgaagaaacagtgattgacgcttattgcggcattggttctatt
tccctttgtctcgcgaaaaaagccaagcatgtctatggggtagaaattgtggatcaagcg
atacaagatgctcgtgcaaatgcagaactcaatgaattagcgaatactacttttgaaaca
gggaaagcagaagaggttattccatcttggtataaagctggcattgtagcagatgtctta
gttgtcgatccaccacgaaaaggctgcgatgaaaagttacttgaaactattttggcaatg
aaaccaaagaaagtagtatatgtttcttgtaacccagggacattagcccgagatatgaaa
atattaacagatggtggctatgtagcgaaaaaagtccaaccagtagatatgtttccaatg
acgacacatattgaagctgtgactgttttacatttaaattaa
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