Lagopus muta (rock ptarmigan): 125687783
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Entry
125687783 CDS
T09141
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
lmut04260
Cardiac muscle contraction
lmut04261
Adrenergic signaling in cardiomyocytes
lmut04270
Vascular smooth muscle contraction
lmut04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125687783
04020 Calcium signaling pathway
125687783
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125687783
09153 Circulatory system
04260 Cardiac muscle contraction
125687783
04261 Adrenergic signaling in cardiomyocytes
125687783
04270 Vascular smooth muscle contraction
125687783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125687783
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125687783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
G0-G1_switch_2
Motif
Other DBs
NCBI-GeneID:
125687783
NCBI-ProteinID:
XP_048789003
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
EQVEYVFLIIFTVETFLKIIAYGLVLHPSAYIRNGWNLLDFVIVIVGLFSVILEQVSHKT
RRLTTLSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKAMVPLLHIALLVLFV
IIIYAIIGLELFIGRMHKTCFFIGSDLESEDDPSPLCFFRGTARACLQKQHGVQGPLGGP
QWCITNFDNFFFAMLTVFQCITLEGWTDVLYWMQDAMGHELPWIYFVSLVIFGSFFVLNL
VLGVLSGMCHTCPSHQRVLQEREKAKARGDFQKLREKQQLEEDLRGYMDWITQELMGKRK
PRLKWLRHPSHSTDTHASLPGSETTSVXTPRQRGEEEAQPNACDRCLGKITKTKFWRRLR
RLNRVLRRRCRGAVKSVSFYWTVLLLVFLNTLTIASEHHGQPQWLTETQAYANKALLSLF
AAEMVLKLYALGPSCYFASFFNRFDCFVVCGGVLETALVERGAMEPLGISVLRCVRLLRV
FKVTRHWASLSNLVGSLLNSMKSIASLLLLLFLFIIIFALLGMQLFGGRFSFDETQTKRS
TFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPVFPGMLVCVYFVILFICGNYILLNV
FLAIAVDNLADGDNINSGAEGKKDKAGEVEANVGSQDVSVKVEREQQEEEEEEEDEEGSE
EGDEGAGGERDSLGGQRLESLEEPPKNKVAPIPEGSAFFLLGSTNPLRVRCHALIHHHVF
TNLILVFIILSSVSLAAEDPVRAHSPRNHILGYFDYAFTSIFTVEILLKMTAFGAFLHKG
SFCRNWFNLLDLLVVGVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCV
FVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEAKHTPGECKGTFLVYKDGDVS
HPSVRERLWHNSDFNFDNVLAGMMALFTVSTFEGWPALLYKAIDANAEDQGPIYNYRVEI
SIFFIVYIIVIAFFMMNIFVGFVIITFRAQGESEYRNCELDKNQRQCVEYALKAQPLRRY
IPKNRTQYRVWAMVNSTAFEYIMFVLILLNTIALAVQHYEQSKPFNYVMDLLNMVFTGLF
TVEMVLKIIAFKPRHYFCDAWNTFDALIVVGSVVDIAVTEVNSSEDSSRISITFFRLFRV
MRLVKLLSKGEGIRTLLWTFVKSFQALPYVALLIAMIFFIYAVIGMQTFGKVALQDGTQI
NRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDAGPGEEFTCGSNFAIVY
FISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRVWSEYDPAARGRIKHL
DVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTE
GNLDVANKELRAVIKKIWKRTKPKLLDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRRRK
ERGMLGPSASPSNERALQAGLQTLQALGPEMRRALSCDLGEDGGGGAEEEEEEEEQLTYA
APEALYGSAPDSPGMGDAPKAPPSPSEGEEPAAPPHGVTQRHGGRHSAGGSGSLPAAGQE
EPPEEREEPGDVGGEEEMQGAAPRLSWAADSRLPGPTAAPQPPRWAGVAQRGGSLPLPNR
HFALRVPGGTMEGQQLKRRRLLPPTPAGRKPSFTIQCLRRQGSCEDEPIPGTYTPSGPPG
PARPQGYGSSETWRLGSSSHAWATAPARGHVLYAPLILVEGGAPPGGSAGGSLPPLSRWF
PSXGPSACGSRWGRGSADSLVEAVLISEGLGLFARDPKFVAVAKREIADACEMTMDEMES
AAADLLTRRHHGPPPPHSAAAAVYSDEETLRAAPGEEELADEMVCVGGP
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
gaacaagtggagtacgtcttcctcatcatcttcacggtggagacgttcctgaagatcatc
gcctacgggctggtgctgcaccccagcgcctacatccgcaacggctggaacctcctggac
ttcgtcatcgtcatcgtggggcttttcagcgtcatcctggagcaggtgtcccacaaaacc
cggaggctcaccacattgagcggcaaaccgggcggcttcgacgtcaaagctctgcgcgcc
ttccgcgtcctgcggcccctccgcctcgtctccggggttcccagtctccacatcgtcctc
aactccatcatgaaggccatggtgccgctgctgcacatcgccctgctggttctcttcgtc
atcatcatctacgccatcatcggcctcgagctcttcatcggccgcatgcacaagacctgt
ttcttcatcggctctgacctggaatcggaggacgacccttcccccctgtgcttttttcgg
ggcacggcccgggcctgcctgcagaaacaacacggagtgcaggggccgctgggagggccc
caatggtgcatcaccaactttgacaacttcttcttcgccatgctcaccgtcttccagtgc
atcaccctggaggggtggaccgacgtcctctattggatgcaggacgccatgggccacgag
ctgccctggatttacttcgtcagcctcgtcatctttggctccttcttcgtcctcaacttg
gtgctgggggtgctgagcggcatgtgccacacgtgcccatcccatcagagagttctccaa
gagcgtgagaaggccaaagcacgcggcgacttccagaagctgcgggagaagcagcagctg
gaggaggacctgcggggctacatggactggatcacacaggagctgatggggaagcgaaaa
cctcgcctcaagtggctgcgacaccccagccactccaccgacacccacgccagcctcccc
ggcagcgagacgacgtcggtgnnaacaccgagacagcggggtgaggaggaggcgcagccc
aatgcctgcgaccgctgcctgggcaaaattaccaagacgaaattctggcgccgcctgcgc
cgcctgaaccgggttctgcgccggcggtgccgcggcgcggtgaaatccgtctccttctac
tggacggtgctgctcctcgtcttcctcaacaccctcaccatcgcctccgagcaccacggg
cagccccagtggctcaccgagacgcaagcctatgccaacaaagccctgctctcgctcttt
gcggccgagatggttctgaagctctacgccctggggccctcctgctacttcgccagcttc
ttcaaccgcttcgactgcttcgtggtgtgcggaggggtgctggaaacggccctggtggag
cgcggcgccatggagcccctgggcatctccgtgctgcgctgcgtgcgcctgctgagagtc
ttcaaggtcaccaggcactgggcgtcgctgagcaacctggtgggctcgctgctgaactcc
atgaagtccatcgcatcgctgctgctgctgctcttcctcttcatcatcatcttcgcgctg
ctgggcatgcagctcttcggtggccgcttcagcttcgacgagacgcagaccaagcgcagc
accttcgacaccttccctcaggccctgctcaccgtcttccagatcctaactggggaggac
tggaacgcggtgatgtatgatgggatcatggcttatggtgggcctgtcttccctgggatg
ctcgtctgcgtctacttcgtcatcctcttcatctgtgggaactacatcctcctaaacgtc
ttcctggccatcgcggtggacaaccttgcggatggagataacatcaactcgggggcagag
ggcaagaaggacaaagccggggaggtggaggccaacgtggggagccaggatgtgagcgtg
aaggtcgaacgggagcagcaggaggaggaggaagaagaagaggatgaggagggcagtgag
gaaggtgatgaaggggccgggggggagcgggacagcctgggggggcaacggctggagagc
ctggaggagccccccaagaacaaagtggcaccgatccccgagggcagcgccttcttcctg
ctgggcagcaccaacccgctgcgggtgcggtgccacgctctcatccaccaccacgtcttc
accaacctcatcctcgtcttcatcatcctcagcagcgtctcgctggccgccgaggacccc
gtgcgcgcccactcgccccgcaaccacatcctgggctacttcgactatgccttcacctcc
atcttcaccgtggagatcctgctgaagatgacggccttcggcgccttcctgcacaaaggc
tccttctgccgcaactggttcaacctcctcgacctgctggtggtcggcgtctccctcatc
tccttcggcatccactccagtgccatctcagtggtgaaaatcctgcgggtgctgcgcgtc
ctgcggcccctgcgagccatcaaccgtgccaagggcctcaagcacgtggtgcagtgcgtc
ttcgtggccatccgcaccatcggcaacatcatgattgtcaccacgctgctgcagttcatg
tttgcctgcatcggggtgcagctcttcaagggcaagttctacagttgcaccgatgaggcc
aagcacacgcctggggagtgcaagggcaccttcctggtgtacaaggacggggacgtgtcc
cacccgtcggtgcgcgagcgcctgtggcacaacagcgacttcaacttcgacaacgtgctg
gcaggcatgatggccctcttcaccgtctccaccttcgaggggtggcccgcgctgctgtac
aaagccatcgacgccaacgcggaggaccagggccccatctacaactaccgggtggagatc
tccatcttcttcatcgtctacatcatcgtcatcgccttcttcatgatgaacatcttcgtc
ggcttcgtcatcatcaccttccgtgcccagggcgagagcgagtaccgtaactgcgagctg
gacaagaaccagcggcagtgcgtggaatacgcgctgaaggcgcagccgctgcggcgctac
atccccaagaaccgcacgcagtaccgcgtctgggccatggtcaactccactgccttcgag
tacatcatgttcgtcctcatcctgctcaacaccatcgccctggccgtgcagcactacgag
cagtccaagcccttcaactacgtgatggaccttctcaacatggtgttcaccgggctcttc
accgtggagatggtgctcaagatcatcgccttcaaaccacggcattacttctgtgatgcc
tggaacacctttgacgccctcatcgtggtgggcagcgtggtggacatcgccgtcaccgag
gtcaacagctcagaggacagctcccgcatctccatcaccttcttccggctgttccgcgtc
atgaggttggtgaagctgttgtccaaaggcgagggcatccgcacgctgctctggaccttc
gtcaagtccttccaggccttgccctacgtcgcgctgctcatcgccatgatcttcttcatc
tacgctgtcattggcatgcagacctttgggaaggtggctctgcaggatgggacccagatc
aaccgtaacaacaacttccagaccttcccccaggccgtgctgctgctcttcaggtgtgcc
acgggggaggcctggcaggagatcatgctggccagcctgcctggcaagcgctgcgacccc
gagtcggacgcaggacccggcgaggagttcacctgcggcagcaacttcgccatcgtctac
ttcatcagcttcttcatgctctgcgccttcctgatcatcaacctcttcgtggccgtcatc
atggacaactttgactacctgacacgggactggtccatcctcggcccccatcacctggat
gagttcaagcgtgtctggtccgagtacgacccagctgccaggggccgcatcaaacacctg
gacgtggtgacgctgctgcgccgcatccaacccccgctgggctttgggaagctgtgccca
catcgtgtcgcctgcaagcgcctggtagccatgaacatgcccctcaactcagatggcacc
gtcaccttcaacgccacgctgtttgccctggtccgcacctccctcaagatcaagacagaa
gggaacctggatgtggccaacaaggagctgagggctgtcatcaagaagatctggaagcgg
acgaagcccaagctgctggatgaggtcatcccgcctcctgaggaggaggaggtgaccgtg
gggaagttctatgccactttcctcatccaggattatttccgcaagttccggcggcggaag
gagcgggggatgctgggccccagcgccagccccagcaacgaacgcgccctgcaggctggg
ctgcagaccctgcaggcgttgggccccgagatgcggcgggcgctgagctgtgacctgggg
gaggatggaggggggggagcagaggaggaagaggaggaggaagagcagctgacctacgca
gcacctgaagctctgtatggctccgcccctgactccccggggatgggggatgctcccaag
gccccccccagccccagcgaaggggaagagcccgcagcccccccccacggtgtaacccag
cggcacgggggcaggcattcggctgggggttctggctccctccctgctgctgggcaggag
gagccccccgaggagcgggaggagccgggggacgttggaggcgaggaggaaatgcaggga
gcggccccgcggctgtcgtgggcagcagacagcaggctgccgggacccacagctgccccc
cagcccccgcgctgggcaggagtagctcagagggggggatcgctgccgctgcccaaccgg
cacttcgcgctgcgcgtccccgggggaaccatggaggggcagcagctaaaacggcgccgc
ctgctgccgccgaccccggccggccggaagccatctttcaccatccagtgcctgagacgc
caggggagctgcgaggacgaacccatcccaggcacctacaccccgtctgggccacccggt
ccagccaggccgcagggctacggcagctccgagacgtggcgcctgggctcgtcctcccac
gcctgggccacggcccccgcgcgcggccacgtgctctacgctcccctcatcctggtggaa
ggaggagcccccccggggggctcggcgggcggcagcctccccccgctgtcccgctggttc
ccctcgnngggtccctccgcctgcgggagccgctggggccgcgggtcggccgacagtttg
gtggaggctgttctgatctcggaagggttggggttattcgcccgcgaccccaaattcgtg
gccgtggccaaacgggagatcgcggacgcttgcgaaatgacgatggacgaaatggagagc
gctgctgcagacctgctgaccaggaggcaccacggcccacccccgccccacagcgccgct
gctgccgtctacagcgacgaggagacgctgcgggcagcgccaggagaggaggagctggcg
gatgagatggtgtgcgtggggggaccctaa
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