Lagopus muta (rock ptarmigan): 125688794
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Entry
125688794 CDS
T09141
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125688794 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125688794 (VPS54)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125688794 (VPS54)
Membrane trafficking [BR:
lmut04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
125688794 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
ASL_C
Motif
Other DBs
NCBI-GeneID:
125688794
NCBI-ProteinID:
XP_048791232
LinkDB
All DBs
Position
2:complement(101815935..101860404)
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AA seq
974 aa
AA seq
DB search
MASSHSSSPVPQPNSSDAFFKKEKDVAKRFQPVQSLPDVCPKEPTGDASSLCDSPSLVAD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFALY
QQEIAPREKVHERCKNICPSKDTFDRTLLHTYDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMIITAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQIRMMNFPQWFDLLKDIFSKFTIFLKRIKATLNTIRSVVLLVL
DKNQRTRDLEDTLQKNSVKDSPLDTEVAYLTHEGMFISDAFGEGDLPLVAADTTSQRNTS
PNSEPCSSDSVSEPECTTDSSSSKEPTSSVTPGVEMMISDDMKLTELELGRLANNIQELL
YNASDICHDRSVKFLMARAKGGFLEKLNSNEFVALSRLMEGFILDTEQICGRKSMSLRGA
LQSQANKFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPTGA
EERKPTEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFNSR
SCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLRHF
DHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAIYD
LLPEEQTQILFLRINASYKLHLKRQLAHLNVVNDGGPQNGLVTSDVAFYTGNLQALKGLN
NLDLNMAEIWEQKR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagccaaacagcagcgatgctttcttt
aaaaaggaaaaggatgttgcaaaacgcttccagcccgtgcagtcactgcctgatgtgtgt
cccaaggagcctacaggcgatgccagtagtttatgtgacagcccgtctctagttgcggat
cagcacagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcgctccgagagagaaagttcatgaaagatgcaagaatatttgtccttct
aaagataccttcgacaggactctattacacacctatgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacgtttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatctggacattgtggaagtcaatatt
gctcatcagatttctctgcgctctgaagcattttttcatgcgatgacctctcagcatgag
ttacaggactacctcaggaaaacctcccaggctgtaaaattacttagagagaaaatctcc
aaaattgataaagtaatgtgtgaaggctctcttcgagttttaagactgtcgctcaccaga
aataattgtataaaagcatacaataaactgaagttaatggctactgtacaccaaacgcag
cccacagtacagttgctgctgtctacttctgagtttgttggagctttggacttgatagca
acaacgcaggaggtgttgcagcaggaacttcaaggcattcacagtttccggcaccttggc
tcacagctctgtgaactggaaaagctgatagataaaatgatgattgcagagttttcaacg
tacgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatcactagtatttggacttttaaagcaaaggaagctaaatttttatgaaata
tacggagatgaaatgattattactgcaaagaatataataaaacagtgtgtggttaatacg
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcagaccagataaga
atgatgaattttcctcagtggtttgatttattgaaggatattttttccaagtttactatc
ttcctcaagagaataaaggcaacgttaaatactatccgtagcgtggttctcttggttcta
gacaagaaccaaagaaccagagacctggaggacaccttgcaaaagaactctgtgaaagac
agtcccttggacacagaagtggcttacctgacacacgaaggcatgtttataagcgacgcc
ttcggcgagggggacctcccacttgtagcagctgacactacctctcagagaaacacttct
cccaacagcgagccctgtagcagtgattcagtctctgaaccagagtgcactacagactct
tcatccagcaaggagccaacgtcgtctgttactccgggagtggagatgatgatcagcgat
gacatgaagttgactgaactggaactgggcaggctggcaaataacattcaagagttgttg
tataatgcttctgatatctgccatgatcgttcagtcaagttcctcatggcaagagcaaag
ggtggcttcctagagaagctgaattccaatgagtttgtcgctctttctcgcttgatggaa
ggctttatcttagatactgagcagatctgtggcagaaaaagtatgtccttgcgaggagca
cttcaaagtcaagccaataaatttgtgaataggttccatgaggagaggaagacaaagcta
agcctactcttggacaacgagcgctggaagcaagctgaagttcctgccgagtttcaggat
cttgttgattctgtgtcagatggcagaatttctctccctgaaaaaaaaccaacaggtgct
gaagaaaggaagccaactgaattccttattgttgaaggacaaaaatatgcaacagttggg
acagtattgctgttaataagaataatcctggagtactgccagtgcgtggataacattcct
tccatcaccaccgacatgctcacccgcctgtctgatttactgaagtatttcaactctcga
agctgccagctggtgcttggagccggtgcattacaagttgttggattgaaaacaatcact
acaaaaaatttagccctttcttcacgttgcctacagctaatcgtacactacattcctatt
atcagggctcattttgaagctcggctgcagccaaagcagtttagcatgctcaggcacttt
gaccacattacaaaggattatcacgaccacatagctgaaatctcagcaaagctcgttgcc
atcatggatagcttatttgacaaactgttatccaagtatgaagtgaaagctcctgttcct
tcagcatgcttcagaaatatctgcaagcaaatggcaaagatgcatgaagctatatatgat
ctccttcctgaggaacaaactcagatcttgtttttaagaattaatgcaagctacaaactt
catctgaaaaggcagctggcccatctaaatgtagtcaatgatggaggacctcagaatgga
ctggttacgtcagatgtagctttctacactggaaaccttcaagctctgaaaggccttaac
aacttagacctaaacatggctgaaatttgggagcagaagaggtga
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