Lagopus muta (rock ptarmigan): 125688816
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Entry
125688816 CDS
T09141
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125688816 (TDRD6)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125688816 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
DUF4537
SGF29_Tudor
Agenet
DUF4088
Tudor_3
Motif
Other DBs
NCBI-GeneID:
125688816
NCBI-ProteinID:
XP_048791278
LinkDB
All DBs
Position
2:complement(1141427..1152114)
Genome browser
AA seq
1684 aa
AA seq
DB search
MGSVPELPGPGAAVSLQVRAVDVRPTAPVVRLWGALGERRAERVRPCADIRAAAGSERGA
GRLAGGAELRAGELGLVELAGLWHRCRVLSLRGRGRRVFLLDEGRAVTVSAEYLARGGPE
LFGPPPEALGCVVADLVPPESPAAGACGDASSSAWTEEAMELLRCLHGKELPGIVRELLV
PQRLLVLELPLLVAQMRRLGLAGHASPGAFGQLLRRCLPREAESGASPAHLCDGEGEPAA
PCGRSYVEMRPGPSYGGQLEVGCTVDVVVTCAESPGYFWCQLKKCGEFTALMAEIQEYCE
SASQPHAWPQSACLARYSEDKRWYRALIVSDVSPAGEVEVMYVDYGNRELVSLTSLRSIN
ERFLKLKAQAFRCSLYNLIHPNGPDPFVWDEAAILAFQEFVDASSNQFELQCTIFALASR
NNRELFNIVDLMTPFQSASQFLTDRGVAKRLPPQTPLAASVRLHSFYYSMHEIKIGSEED
VFITHVDDPQTFYCQLERCANVLLQLSENVSRLRGMTSGLETWQRFGELCLARYTDSHWY
RGVLTKTKPAKEVFFVDFGNTETIEEDQLFPIPGDAHDILLLPMQAIKCSLADVPNVPQE
ATAWFKQAVLERQLKAIVVAKESGGKLLIELFDGNMQINAKLKEEFRLRNNAEVCRCVRS
TALYSSMGMEKRNGDAHFPPNAGESKNCRPEAQGGERSSKMQVKEKDVNLLQPAAKRERA
AGLLASEGKVSSKKDALLNKVEEMQSLLSAEMDAESDNKRDTEGSCVLLKRVTDLPQQSV
VPALTALAYVSYVNNPLDFYVQLASDEAQLHSISECLKDEMLAKIPCGQLLQAGDLICAL
YSDDSLWYRAVVKEKASDHLISVRYIDYGNTSVVDVDQVRRLPEDLESIPAIGIHCFLGG
LKCKMSTGWAEKAAPCFTKRVNEALLTCEFVEEVDGKWGVILSDDQGEITVDLVDERSYS
NGMLDRSDVINTCEPSSPGAQNEASCDCTSLTWKFPEAGQTVHVYITVVNGPDYFWSCSA
DEKNMTYVEEKIKEAENLGLNSMDSCIKSGDICLAKYSEDGKFYRAKVSSVKGNDVAVIH
VDYGSEETVSLEMLKAIPGELLQVPNQAFACCLSGFSPSEGSWLSEAKDKFYDMTVELLL
EAEVLGTQENKAFEVPLCAVKLESPGRNINEEMKSFWKADMGSGHKDIPDPEGSLEGNRS
SNSDAGLCLKRETATCGLAQEVRESALLCSQCSSGEPCGCSGGSEAKVSAESREVAGGCE
TAEHGSSFDKETAPLEDESSSKVLLEPRGSCSLHGLGGGMKSALQEPPELLFLQDAEVKA
EVEAASPLPGNEEELMRWLQVEPSMGDTTEALIELVELQMHSSYDDLKELILELEEIAAL
PSVTDEMREALETEALGMQTASGSEAREKVLEVREPLLLCEEMGHSALLQSGTVPSLSEG
ESSMPSVSDAGKTAELFPSDFLPLRQTAEVLELNCSGVHGAEAVQEDWMEVEPPLMLPSS
DGRPEKQPKAPGAEIDQLLDLHKNDDCYVKEWTQQDMEELFKECGSTPTHMQSSDCKPSE
EAGKKQSDNMADYSAGCSGYTCKLKGFAVGSKCVVWTSQQWCEALILEVSEKGTRVLNLC
SGSEEVVDPENVWNVIPSWAGTSPERTTHVTEDVLSLPEESLLQEEQSGCSSARSEDPHV
LQPF
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgccggagctgcctggccctggggccgccgtctcgctgcaggtccgggcc
gtggacgtgcgaccgacggcgcccgtggtgcggctgtggggagcgttgggtgagcgccgc
gcggagcgcgtccggccgtgcgccgacatccgggcggccgcggggagcgagcgtggagcc
ggacggctggcgggaggcgcggagcttcgcgccggggagctggggctggtggagctggcc
gggctgtggcaccgctgccgggtgctgagcctccgcggccgcggccgccgcgtgttcctg
ctcgacgagggtcgcgcggtgacggtgtccgccgagtacctggcgcggggcggcccggag
ctgttcggtccgccgcccgaggcgctgggctgcgtggtggccgacctggtgccgcccgag
agccccgcggccggagcgtgcggagacgcgtcgagctccgcctggacggaggaggcgatg
gagctgctgcgctgcctgcacggcaaggagctgcccggcatcgtgcgggagctgctggtg
ccgcagcggctgctggtgctggagctgcccctgctcgtggctcagatgcggcggctgggc
ctggccgggcacgcgtctcccggtgccttcggccagctgctccggcgctgcctgccgcgc
gaggccgaaagtggcgcctcccctgcccacctgtgcgacggcgaaggagagccggcggcc
ccgtgcgggcggagctacgtggaaatgaggcccggtccctcctacgggggtcagctggaa
gtgggatgcacggtcgatgtggttgtaacgtgtgctgagagccccggttatttctggtgc
cagttgaagaagtgtggtgagttcactgcgttgatggctgaaatccaggagtactgtgag
agcgcgtcccagccgcacgcctggccgcagtcggcgtgcttggcccggtactcagaggac
aaacggtggtacagggctttaattgtcagcgatgtcagtcctgcgggtgaagtagaggtc
atgtatgtggactacggcaacagggagctggtgtccctaacgagtctccgctccattaac
gagcgcttcctcaagctgaaggcccaggccttcaggtgcagcctttacaacctaatccac
cctaatggtccggacccgtttgtttgggatgaagctgcgatcctggctttccaggagttt
gttgatgcctcctcaaatcagtttgaactgcaatgtaccatatttgccttggcttcgagg
aacaacagggagctgttcaacatcgtagatttaatgacgcctttccagagcgcatcccaa
tttctgacagacagaggtgtggccaaacgtctgccgcctcaaacgcctctggcagcctcc
gttcgactgcattctttctattattccatgcacgagatcaaaatcgggagtgaagaagat
gtttttattacgcacgttgatgatcctcagacattttactgccaacttgaaaggtgtgcg
aatgtcctgttgcagctcagtgaaaacgtttctcgtctcagagggatgacgtcgggctta
gaaacctggcagaggtttggtgagctgtgtctcgccaggtatactgacagccactggtac
cggggggtccttacaaaaacaaaacccgccaaggaagtcttttttgtggattttgggaac
acagagaccattgaagaagatcaactgtttcctattccgggtgatgctcatgatatcttg
cttttgccaatgcaggccataaagtgttccttggctgacgtacctaatgttccccaggaa
gctacagcgtggtttaagcaagctgtccttgaaaggcaattaaaggcaattgttgtagca
aaagaatctggtgggaaactgttgattgagctgtttgatggtaacatgcaaatcaatgca
aaattgaaggaggagttcagattaagaaacaatgcagaagtgtgtaggtgtgtaaggagt
acagctctgtactctagtatgggtatggaaaagaggaatggggatgcacactttcctcca
aatgcaggagaaagcaaaaactgcagacctgaagcccaaggaggagagaggagtagcaaa
atgcaggtcaaagaaaaagatgtaaaccttctccagcctgctgcaaagagagaaagggct
gctgggttactggcatctgaggggaaggtcagcagtaagaaagatgctctgttaaataag
gtggaggaaatgcagtctctgctctctgccgagatggatgcagagtcggataataaacgt
gatactgaaggcagttgtgtgctgctgaagcgtgtaactgatctgccacagcagagcgtg
gtgccggctctcacagcgttggcatatgtctcctatgtaaataatcctttagatttttat
gttcaactggcaagtgatgaggctcaacttcacagcatttcggaatgcttaaaggatgaa
atgctagcaaagatcccctgcgggcagctcttgcaagctggggacttaatctgtgctctg
tattcagatgacagcctgtggtacagggcagtggtaaaagagaaggcttctgaccatttg
attagcgtccgatatattgattatggtaatacttcagtagttgatgttgatcaagtgcgc
aggctccctgaagacttagaatctattccagcaataggcattcactgcttcctaggtggg
cttaaatgcaaaatgagtacaggctgggcagagaaagcagctccttgcttcacaaagagg
gtaaatgaggctctgctaacatgtgaatttgtggaggaggttgatggtaaatggggagtt
attctgagcgatgatcaaggtgaaataacagtggatttagtggatgaaagatcttattca
aatggaatgcttgatagaagtgatgtgataaatacgtgtgagccttcgtctcctggggcg
caaaatgaagcttcctgtgactgtacatcacttacctggaagttccccgaggcaggccag
actgtacatgtttatatcacggtggtgaatggtccagactatttttggagttgcagtgct
gatgaaaaaaacatgacctacgtagaggaaaaaataaaggaagccgaaaaccttggacta
aactctatggacagctgcattaaaagtggtgatatttgcctagcgaagtacagcgaagat
gggaagttctacagagctaaggtcagcagcgtgaagggcaacgatgtagctgttatccat
gtggactatggaagtgaggagactgttagcttggagatgctcaaagcaattccaggtgaa
ttgcttcaggtgcctaatcaagcatttgcttgctgtctgtcaggtttcagtccctcagag
ggctcgtggcttagtgaagccaaagacaagttttatgatatgactgtagagctcctacta
gaagctgaagttcttggaacccaggagaataaagcttttgaagtccctctgtgtgctgtc
aaactggagtctcctgggaggaatattaacgaagagatgaaatctttttggaaggctgat
atgggaagtggtcacaaagatattccagaccctgagggttccttagaaggaaacagaagt
tcaaacagtgatgcgggtctttgtctcaaaagagaaactgctacctgtggattagctcaa
gaagtaagggaaagtgctttgctttgttcccagtgctcctcgggtgaaccttgtgggtgt
tcaggtgggtctgaagcaaaagtgtctgctgagtctcgggaggtggctggtggatgtgaa
acagctgagcatggaagcagctttgataaagagactgctccactggaagatgagagcagt
agcaaagtattattagagccaagaggaagctgcagtcttcacggtttgggaggtggaatg
aaatctgcactacaagagccacctgaattactgtttctgcaggatgctgaggtgaaggca
gaagtcgaggcagccagccctctgccaggaaatgaagaagagctgatgagatggctccag
gtagagccttcgatgggtgatacaacagaggcactgatcgaactagttgaattgcaaatg
cactcttcttatgatgacttgaaagagttgatactggagctggaggaaatagcagcactg
ccctcagtcactgatgagatgagggaagcacttgaaacagaggcacttggaatgcagact
gcttcaggcagtgaagcgagagagaaagtgctggaagtacgtgagcccctgctcctgtgt
gaggagatggggcactcagcactcctgcagtctggaaccgtgccttcacttagtgaggga
gagagctcaatgccctctgttagtgatgcagggaagacagcagagctgtttccttctgat
tttctgcctctgaggcagactgcagaggtgctggaattgaattgctctggggtgcatgga
gcagaagctgtgcaagaagactggatggaagtagagcctcccctcatgctgccttcatct
gatggtagacctgagaaacaaccaaaggcccctggtgccgagattgatcagcttctggat
ttgcacaagaacgatgactgttatgtgaaagaatggacgcagcaagacatggaggagttg
tttaaagaatgtggaagcactcctacacacatgcagtcttcagactgtaaacctagtgaa
gaagcaggaaaaaagcaaagtgataacatggctgactatagtgcaggatgcagtggatat
acttgtaagctgaagggctttgctgttggctccaagtgtgtggtgtggacatctcagcag
tggtgcgaggctctcattttggaggtatctgagaagggcaccagggtactgaatctctgc
agtggcagtgaggaggttgtagatcctgagaacgtctggaacgttattcccagctgggct
ggcacatcacctgagagaactactcatgtgacagaagatgtgctgtccctgccagaggaa
tctttacttcaagaagagcaaagtggctgcagttcagctagatctgaagatcctcatgtt
ctccagcctttctga
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integrated database retrieval system
