Lagopus muta (rock ptarmigan): 125693376
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Entry
125693376 CDS
T09141
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmut04131
]
125693376
Membrane trafficking [BR:
lmut04131
]
Protein recycling
Others
Others
125693376
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
125693376
NCBI-ProteinID:
XP_048801196
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Position
5:complement(55592442..55864632)
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AA seq
1259 aa
AA seq
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MEKVAGWYPAWHVALLYWTWLFLFTFGFTGAEITCRSCHSQVKPQQQHPQQGLPMHLKTD
RGEKEQWRIPGEQGGERGQGAGMDTEDAELQAPFDPAVAGTKFSGWETRSWASEPEKELG
AGRPEAAAAPTGEYLQRGHWGGRRNSTRRRRGRSPRGTAGPGGAAGREPGGSGAARFGLE
ELRLGSTTFALTGDSAHNQAMVHWSGQNSSVILILTKLYDYNLGSITESSLWRSTDYGTT
YEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISTDEGATYQKYRLNFYIHS
LLFHPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVAPNRFYWSMMVSSREPDLVHLEA
KTVDGHAQYITCKMQNCSEASQNKPFPGYIDHNSLIVQDDYVFVQVTSGGRPHYYVSYRR
NAFTPIKLPKYSLPKDMHVISTDESQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVK
SSQGLDGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWNLLQAPDTDLKGNPV
HCLLPYCSLHLHLKVSENPYTSGNIASRDTAPSIIVASGNIGPELSDNDISMFVSSDAGN
TWRQIFEEEHSVLYLDQGGVLVAIKHTSLPIRHLWLSFDEGKSWSKYSFTSLPLFVDGIL
GEPGEETLIMTVFGHFSHRSEWQLVKIDYKSIFDRRCTEEDYWTWQLHSQGEACIMGAKR
IYRKRKSEKKCMQGKYAGGMTSEPCVCTDADFDCDYGYERHSNGQCLPAFWYNPSSLSKD
CSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQQCPGKAPQGLRIITSDGKLTAEQGHN
VTFLVQLEEGDLQRSLIQVDFGDGTAVSYANLSSTEDGIKHTYQNVGIFRVTVLVENSLG
SDNAVLYLHVTCPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYVWWFGNNTEPLIT
LEGSITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEQFRSLRLSFSPNLDDYNPDIPE
WRRDISRVVKRALVEATGISSKHILVAVLPGLPTSAELFILPHQDATGENKRTAEDLEQI
SEILIQKLNQNFVHFELKPGVRVLVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAV
FVIYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQSELMSPEQLVDEKLDVQP
IEQPQATVQNPRKGNAAKVVWTEDFQKACGSPRGFKPRPGAEVFPQLLSPRAQKKSLPM
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttttggctttaccggcgctgaaataacttgcagatcctgccattcc
caggtgaagccgcagcagcagcatccgcagcagggattaccgatgcatttgaagaccgac
aggggagaaaaagaacagtggaggatcccgggggagcagggaggtgagagagggcaaggg
gccgggatggatacggaagatgccgagcttcaagcacccttcgaccctgctgtggcgggg
accaaattcagcggctgggagacccgcagctgggcgagcgagccggagaaagagctcggg
gccggccggcccgaagcagcggcagctcctaccggggagtaccttcagcggggtcactgg
ggcggccggcggaactcgacccggcggcggcggggccgcagcccgcggggcacggcgggg
ccgggcggtgccgcggggcgggagccggggggctccggcgccgcccgcttcgggctggag
gagctgcggctgggcagcaccaccttcgccctcaccggcgactcggcgcacaaccaagcc
atggtgcactggtcgggccaaaacagcagcgtgattctaattctgacaaagctatatgac
tacaacctgggaagcatcacagagagctctctttggaggtcaacagattatgggacaacg
tatgagaaattgaacgataaagttggcctgaagacgattttgagctacttatatgtctgt
ccaacaaacaaacgaaagattatgctgttgactgatccagaggttgagagcagcttactg
attagtactgatgaaggtgccacgtatcaaaaataccgtctgaacttctacattcacagt
ctgctcttccacccaaagcaggaagactggatcttagcatatagtcaagatcaaaagtta
ttcagttcagtggagtttggcagaagatggctgcttcttcatgaaggagttgcaccaaac
aggttctactggtctatgatggtgtccagtagagagccagatcttgtgcacctggaggca
aagacagtggatggtcatgcccagtacatcacctgtaagatgcagaactgcagtgaagcc
tcacaaaacaaaccttttccaggctacattgaccataactccctgatcgtccaggatgac
tatgtcttcgttcaggtgacgtcaggtggaagaccgcattattatgtttcttataggagg
aatgcatttacaccgataaagctgccaaagtactccttgcccaaggacatgcatgttatc
agcacagatgagagtcaggtgtttgcagctgttcaagagtggaaccagaacgacacatac
aatctgtatatctctgacacccgaggggtgtatttcaccctggcattggaaaacgtcaag
agtagtcaagggttggatgggaatgtgatgattgacctctatgaggtagcagggataaag
ggaatgttcttggctaacaagaagattgacaaccaagtgaaaactttcatcacctacaat
aaagggagagactggaatttgttgcaggctccagacactgatctgaaaggaaaccctgtt
cactgtctcctgccctattgctcccttcatcttcacctgaaggtctcagagaatccctat
acctcaggaaacattgccagcagagacactgcccccagcattattgttgcttcaggtaat
ataggccctgaactatcagacaatgatatcagtatgtttgtttcttctgatgctggaaac
acatggagacagatctttgaggaagagcacagtgttctgtacctggatcaaggaggagta
ctggttgccataaaacacacatctctgcctatcagacatctctggttaagttttgatgaa
gggaaatcctggagcaagtacagtttcacatcactcccactgtttgtagatggaatttta
ggggaacctggagaggaaactcttatcatgacagtgtttggacatttcagtcaccgctca
gagtggcagctggtgaaaattgattacaagtccatttttgatcggagatgtacagaagag
gactactggacttggcaactccacagccagggagaagcttgcatcatgggagcaaaaagg
atctacaggaagcgcaagtcagagaagaaatgcatgcaaggaaaatatgctgggggtatg
acttcagagccatgtgtatgcacggatgcagactttgactgtgattatggatatgaacgc
cacagcaacgggcagtgtttaccagcattttggtataatccatcttccttgtcaaaagac
tgcagccttggacagagttatctcaacagcactgggtaccgaaaagttgtttctaataac
tgcacggatggtgtgagagagcagtacacagcaaaaccacagcaatgtcctggcaaagct
ccccagggtcttcgcataataacctctgatggcaaactgacagctgagcaaggacacaat
gtcacttttctggtgcaactggaagagggagatctccaaagatccctcattcaggtggat
tttggtgacggcaccgctgtttcatatgccaatctcagctcaacagaagatgggatcaaa
cacacctaccagaacgtgggcatattccgagtgaccgtgctggtggaaaatagcctggga
tctgacaatgctgtcctctacctgcacgtaacatgtcccttggaacatgttcatttatct
cttccatttgtcaccacgaagaacaaggaggtcaatgccacggcagtactgtggccaagt
caagtgggaacacttacttacgtctggtggtttgggaacaacacagagccactgatcact
ttggaagggagcatcacatttacattttctgtagaagggatgaataccatcactgttcag
gtctcagcaggaaacaccattcttcaggacacaaagaccatcgctgtgtatgagcaattt
cggtccttgaggttatccttttccccaaacttggatgactacaatccagatatcccagag
tggagaagggacatcagccgtgtagtcaagagagctctggtggaggcaacaggtatttca
agcaagcatattctggtcgcagtgctccctggcctgcccacatctgctgaactcttcatt
ttgccacatcaagatgccacaggggaaaataaaagaacagcagaagacctagagcagatt
tcagaaatactgatccagaaactgaaccaaaacttcgtccattttgagttgaagccaggg
gttcgagtccttgtccatgctgcccatttaacagcagctcccctggtggacctcactccc
agtcacagtggttcagcaatgttgatgctcctctctgttgttttcgtgggactagctgtg
tttgtaatctacaaattcaaaaggaagattcctggccttaatatatatgcacagatgcag
aatgaaaaagatcaagagatggtcagtccagtcagtcagagggaaagcatacctaatgtc
cctcaaagtgagctgatgagccctgaacaactagtagatgagaagttggatgtccagccc
atagagcaacctcaggccacagtccagaacccaaggaaaggaaatgcagccaaggtagtc
tggacagaggacttccaaaaggcttgtggatcaccaagaggtttcaagccaagacccgga
gcggaagtatttccacagctgctgagccccagagcacaaaagaaatccctacctatgtaa
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