Lagopus muta (rock ptarmigan): 125695482
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Entry
125695482 CDS
T09141
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lmut01002
]
125695482 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmut04121
]
125695482 (USP47)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125695482 (USP47)
Peptidases and inhibitors [BR:
lmut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125695482 (USP47)
Ubiquitin system [BR:
lmut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125695482 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
125695482
NCBI-ProteinID:
XP_048805898
LinkDB
All DBs
Position
6:complement(8112649..8167792)
Genome browser
AA seq
1376 aa
AA seq
DB search
MVPSEENQLVPKEDMFWSCRQSTFAELKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERV
TLNVPASTPLKKLFEDVASKVGYENGTFDLVWGNGDNVTDMTPIDQNSDKSILDAGFEPG
KKNFLHLTDKDGEQPHIMQEESGTTEDGAQDRFIGPLPREGSISCTNNYVSQSYSYSSVL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERIAKVGS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLESHEYPDHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPTKQIMMENKLEVHKDKTLKEAVGIAYKLMDLEDAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHV
VDLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETTRVVLERCYNDLRLLNVPSKT
LKAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEKSPGSQFRQS
VYQKTGADLGNLDEACERVKGPAGNMKCVEAILEESTEKLKSLSLQQQQQEGDNGDSSKS
TEASDFENIESPSNEIDSSASVENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEY
DESGKSRGETQYVYFKSEPYTADEGSGDRQKWLVVHVDKRITLSAFKQQLEPFVGVPSSH
FKVFRVYANNQEFESVRLSETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCK
FLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEED
INISSNWEVFLEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSGVEELKEKL
SELSGIPLENIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLIQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctcgtccccaaggaggatatgttttggagttgcaga
caaagtacctttgctgaattgaagaagaaattttcacaggtggaaagtgctgctgaggag
cccagagtgctgtgtataatacaagataccacaaattcaaagacagtgaatgaacgcgtt
accttgaatgtgccagcttccacaccacttaaaaagctgtttgaagacgtagcttcaaaa
gtgggctatgagaatggaacctttgatttagtgtggggaaatggagacaacgtcactgat
atgactccaatagatcagaacagtgacaaaagtattcttgatgctggttttgagccaggg
aagaagaactttctgcatttgacagacaaagatggtgagcaacctcatataatgcaggag
gagtcaggtacaacagaagacggtgcccaggacagatttataggtcctcttccgagagag
ggctctattagctgtaccaataactatgtcagtcaaagctactcttactcttcagtcctg
agcaagtcagagacaggttatgtgggtctggtaaaccaagcaatgacttgctatctgaac
agccttttacaaacacttttcatgactcctgaatttagaaatgcattatataaatgggaa
tttgaagaatctgaagaggatcctgtgacaagtatcccgtaccagcttcaaaggctgttt
gttttactgcagaccagcaagaaaagagcaattgaaacaacagatgttacacggagtttt
ggatgggatagtagtgaggcgtggcaacaacatgatgtacaggagctttgtagagttatg
tttgatgctttggagcaaaaatggaagcaaacagaacaggccgatcttataaatcagctg
tatcaaggcaaactgaaagactatgtacgatgtctagaatgtggctatgaaggctggaga
atcgacacatacctggatattcctctggtcatccgtccatatggctccaaccaggcattt
gctagcgtggaagaagcattgcatgctttcattcagcctgagattcttgatggccccaat
cagtatttttgtgagcgatgtaagaagaagtgtgatgcaaggaagggcctgcggttcttg
cattttccatatctgttgacgttacaactgaagagatttgactttgattataccactatg
cacagaattaaactgaatgatcgtatgacttttcctgaggagttagacatgagtatcttc
attgatgttgaagatgagaagtctcctcagactgagagttgcactgatagcggagcagaa
aatgagggcagttgtcacagtgaccagatgagcaatgatttttctaatgatgatggagtt
gatgaaggaatctgcctcgaaagcaacagcgcagcagaaagaattgctaaagtaggcagt
gaaaagaattctttactgtatgaactcttttctgttatggtccattctggaagtgctgct
ggtggccattactatgcctgtataaagtcttttagtgacgaccagtggtacagctttaat
gatcaacatgttagcaagataactcaggaagatattaagaaaacatatggtgggtcttct
ggaagcagaggctattattccagtgcttttgctagctccacaaatgcatatatgctaata
tatagactgaaggatccagcaaggaatgcaaagtttcttgagtcacacgagtatcctgac
catattaagcaattggtgcagaaagagagagaactggaagagcaagagaagaggcaacgg
gaaattgagcgcaacacttgcaagattaaattgttctgtatgcatccaacaaaacagata
atgatggaaaacaaattagaagttcataaggataaaacgctgaaggaggctgtgggaata
gcttacaagctgatggatttagaagacgccgtccctttggattgctgtcgtcttgtcaaa
tacgatgagttccatgactacttggaacgatcttacgaaggagaagaggatacaccaatg
ggtttattgcttggaggcgtcaaatcaacgtacatgtttgacttactgttggaaacaaga
agacctgaccaaattttccagtgctataagcctggtgaggtcatggtaaaagttcacgta
gttgacctgaagactgaatctgttgctcctccaataagtgtacgagcttatttgaatcag
acagtttcagaattcaaacagctaatttcaaaggctacacatctgcctgctgaaacaacg
cgggtggtgttagaacggtgctacaatgatttgcgtcttctgaatgttcccagcaaaacg
ctgaaagctgaaggcttttttagaagcaataaggtatttattgaaagttcagagtcttta
gatcgtcacgtggcatatacagattctcacttatggaaacttctggatcgtcatgcaaat
acaatcaggctgtatgtctcgttaccagagaagtcgcctggatctcagtttagacaatcc
gtttatcagaagactggtgcagatttgggcaacttggatgaagcctgtgaaagggtaaaa
ggacctgcaggcaacatgaaatgcgttgaggcaattctggaagaaagcactgagaagctt
aaaagtttgtccctgcagcagcagcaacaggagggtgataatggagacagcagcaaaagc
acagaagccagcgattttgaaaatatcgaatccccttcaaatgaaatagactcttcagca
tcggtagaaaacagagaacttgaaaaccaaattcagatttctgatccagagaatctccag
tctgaggaacggtcggattcagatgtaaataatgacaggagtacgagttcggtggacagc
gatatcctcagttctagtcacagcagtgatactctatgcaatgtggacaatgccccgatt
cccttggctaatggacttgattctcacagtatcacaagtagtaggcgatcaaaagcaaat
caggggaagaaagaaacctgggacacggcggaagaagattctggaacagacagcgaatat
gatgaaagcggcaagagtagaggagaaacacaatatgtgtacttcaagtcagaaccctac
actgcagatgaaggttcaggagataggcagaaatggttggtggtgcacgttgataaaaga
attacactgtctgccttcaagcaacagttggagccttttgttggagttccatcgtctcac
ttcaaagtctttagagtttatgccaacaatcaagagtttgagagtgttcggctcagtgag
acactttcatcattttctgatgacaacaagataactattagacttggaagagcccttaag
aagggtgaatacagagtcaaagtctatcagcttttggtaaatgaaccagagccatgcaag
tttcttctagatgcagtttttgctaagggaatgaccgtccggcagtccaaagaggagctg
ctccctcagcttcgagaacagtgtggcctggacttaacaattgacaggtttcgtctacgg
aagaaaacctggaagaacccagggactgtgtttctggattatcatatctatgaagaagat
atcaatatttcaagcaattgggaggttttcctagaaatacttgatggaatagaaaagatg
aaatccatgtcacaacttgcagttttatcaagacgatggaggccatcagagatgaagcta
gattccttccaggaagtagtgctagaaagcagcggtgttgaggaattaaaagaaaagctg
agtgaattaagcggaatacccttagaaaatattgagtttgcaaagggtagaggaacgttt
ccatgtgacatttctgtcctagagattcaccaggacttggactggaatcctaaagtatcg
acactgaatgtctggcctctgtacatttgtgacgacggtgcagtaatattttatagggat
aaaaccgaagaattaatggaattaacagatgaacagagaaacgaactgatgaaaaaagaa
agcagcaggctccagaaaactggacaccgggtaacctactctcctcgtaaagagaaagca
ctaaaaatttatctggatggagcaccaaataaagatttgattcaagactga
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