Lagopus muta (rock ptarmigan): 125702955
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Entry
125702955 CDS
T09141
Symbol
POM121C
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121C
KO
K14316
nuclear pore complex protein Nup121
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125702955 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmut03019
]
125702955 (POM121C)
Messenger RNA biogenesis [BR:
lmut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125702955 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
125702955
NCBI-ProteinID:
XP_048822821
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All DBs
Position
20:9545557..9557278
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AA seq
1125 aa
AA seq
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MPGCRCWRAXAARRGMAGAGTGAGPWGRRSAALAALGLALAALACLALWGALLSAAALGA
AGAWCATRPGPPAARPPAKAAANGGPAAPSGRFAKAAPLRPGSGPCAPPQAPRRRYPLPP
SRSAVPGALPAACWDGVLRRSAAWTRRAGPARSPVTVRIGRPRSPARSPVLEQLLSPVAL
LPGGGPDPCAKETVLNAIKESRKRVVEEEEDEEEQQALGSDQESKRRRHDSSGSGQSAFE
PLVANGAPASLIPKPGSLKRGLASQCPDDCSNKRSRTSSMSSLNNTYTSGIPSSLRNAIA
SSYSSSRGLTQLWKRSGVSMSPLSSPASSRPQTPEWPLKKAREEESHRSNTSTPVKSDKE
LQTEKAVVETPVRRKRGSLSPPAASGSSGKRKRKIQLLSSRRGDQLVLPPPPQLGYTITS
EDLDAEKKAALQWFNKVLEDKADAVPSSTTAETTPASRPLVFTVTTEASSSAPVSTAPVA
SSSNLLLDSLKKMQGSQAAPVPADSSGAAIAFQPSSSASQLPAPAVSLESSSLPATSADT
KPVSVLSTAALSVSPASGAQPTSSVAPPATTELGPTPSKPPSVLKPNILFGAPSSPPASQ
PAMTAAAAVPTTTPVFKPIFGALPKSESAAPATTGISAAVTVSVSSAPSSAPSTTTVFKP
IFGSVTATSSPAKVSPFAFKPLSQPASAAEVPAASTTTLVGFTALPNVIFTTAATTATTL
NSSTDATIKPVFSFGLNPPASTSTSLTVTATAATSASQPFTFGGLSSSATSTAPTFATPV
FQFGKPAAATVSATTSVTGGPAFGQAPANSTAATTTAGFSLFGSTTLTSSAPATTGQPAL
TFGSSSSAFGSTFSTNVKPLPPYSGAASQPVFSAVAADSQLPASKPAAGPVGFAPPFSFG
APTAQSTAQPAFGSSALPTFGTGGTQAAFGTTTSVFSFGTATSTAASFGSGTQTTSSGVG
TAVFGTAPSPFAFGATAQPGPSAGAFGLSTPALSGASPAVPFSFGAGQSGAAAAATPFGS
SLTQSTLGAPSQSTPFAFTVPSTPDAKPVFGGTPAPTFGQSTPVPGAVGSGSSSLSFGTP
SAPASAFPGVGTSFGPSTPAFSIGAGSKTGARQRLQARRQHTRKK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccgggttgccgctgctggcgggcgnnggcggcgcggcgcgggatggcgggggccggg
acgggcgcggggccgtgggggcggcggagcgcggcgctggcggcgctgggtctggcgctg
gcggcgctggcctgcctggcgctgtggggcgcgctgctgagcgcggcggcgctgggcgcg
gcgggggcctggtgcgccacgaggcccggcccgcccgcagcgcgcccgcccgccaaagcc
gccgccaacggaggcccggccgccccctcgggccgcttcgcgaaggccgctccgctccgc
ccgggctcggggccgtgcgctccaccgcaggccccacgccgccgctatccgctgccgccg
tcccggagcgccgtgccgggcgcgctgcccgccgcctgctgggacggcgtcttacggagg
agcgccgcctggacgcgccgcgccggcccggcccgcagtcccgtcaccgtgcgcatcggc
cggccgagaagccccgcccgcagccccgtgctggagcagctcctctcgccggtcgccctc
ctgcccggcggcggcccggacccgtgcgcgaaggagacggtgctgaacgccatcaaggag
agcaggaagagggtggtggaggaggaggaggatgaagaagagcagcaggcactgggtagc
gatcaggagagcaaacgaaggcgccatgacagcagcggaagcgggcagtcggcattcgag
cccctggttgccaatggtgcccccgcctctctcatacccaagcctggctctctgaagaga
ggccttgcttcgcagtgccccgatgactgctcaaacaagaggtcacgcacctcctccatg
agctccctcaacaatacgtacaccagtggaatccccagctctctgcgcaatgccattgcc
agctcatacagctccagccggggcctgacacagctgtggaagaggagtggtgtgagcatg
tccccgctatccagccccgcatcctcccgtccccagacaccagagtggcctctcaagaaa
gccagggaggaggagtcgcatcgctccaacacttccaccccagtgaaatcagataaggag
ctgcagacagagaaagcagtggtggagacacctgtgcggaggaagcgcggctccctgagc
cctccagctgcatcggggagcagtggcaagcgcaagcggaagatccagttgctgtcgtct
cgccggggggaccagctggtgctgcccccgccgcctcagctgggctacaccatcacgtcg
gaggacctggatgcggagaagaaggcagcgttgcagtggttcaacaaggtcttggaggat
aaggctgatgcagtccccagtagcaccactgcagagaccacgcctgcgtccaggccatta
gtgttcacagtgaccacagaggcctcctcctcagcacctgtgtcaacagctcctgtcgca
tccagcagcaacttgctcctggacagcctgaagaagatgcagggcagccaggctgcacct
gtgccagcagactcttctggagctgcgatagcattccagccatcttcatcagcatcacag
ctgcctgctcctgccgtgtcactggagtcaagttctctacctgcaacctctgctgacacc
aagcctgtgtctgtgctaagcacagctgccctttcagtctcccctgcctcaggggcacag
cctaccagcagcgtggcacctcccgcaaccacagagctgggcccaacccccagcaaacct
ccctccgtgctgaagccgaacatcctttttggggcaccaagctcccctcctgccagccag
ccggcgatgactgcagctgctgcagtgcccaccacgacccctgtcttcaaacccatcttt
ggtgctttgccgaaaagtgagagcgcagcaccggctacaacaggcatctctgctgcagtc
actgtgtctgtgagctcagccccttcctcggcgccttccaccaccactgtgttcaagccc
atctttggcagcgtgacggcgacttcatctccagcaaaggtctctccttttgccttcaaa
ccgttgtcacagccagcttcagctgcggaagtgccagcagcctccacaaccacactggtg
ggattcacagctctgccaaacgtcatcttcaccaccgcagctacgactgccaccacactc
aactcctccacggatgccaccatcaaaccagtgttcagctttggactcaatccgcctgcc
tccaccagcaccagcctgacagtgaccgccaccgcagccaccagcgcgtcacagcccttc
acgtttggtggcctgtccagctctgccaccagcacggcacccacctttgctaccccagtg
ttccagtttggaaagcccgccgcagccactgtctctgccaccaccagcgtcacaggaggc
cctgcgttcggccaagcacctgcaaactcaacagcagccacaaccactgcgggcttcagc
ttatttggaagcaccacattgacatcttctgccccggccaccacaggccaaccggcgctg
acgttcggctcctccagttcagcttttggcagtactttcagcacaaatgtgaagccactg
cctccgtattcaggggcagcaagccagcccgtgttcagtgccgttgctgcagacagccag
ctgcccgccagcaagcccgctgcgggccctgtcggctttgctcccccgttcagtttcggg
gcgcccacagcccagtccaccgctcagccggcgtttggcagcagcgctctgccgaccttt
ggcaccggtggcacccaggcggcattcgggaccaccacgtcggtgttctcctttgggacg
gccacctctaccgcagccagctttggttccggcacccagaccacaagcagcggcgttggc
accgccgtcttcggcaccgcgccgtctcctttcgccttcggggcgaccgcccagccgggc
ccttctgccggtgcctttgggctcagcacacccgccctgagcggcgcctcacctgcggtg
cccttcagctttggggctgggcagagcggagcggctgcagctgccacgccattcggttct
tccctgacgcagagcacgctgggagcgccgagccagagcacgccgttcgccttcactgtg
cccagcacgcccgatgccaagcccgtgtttggaggaactcctgcccccacctttgggcag
agcacccctgtcccaggagcagtggggagtggcagcagcagcctttccttcgggacgccc
agtgctcctgcctcggccttcccaggagtcggcacgtcctttggtccatcaactccagcg
ttttccattggggcaggatccaagaccggcgctcggcagcggctgcaggcacggcgacag
cacacccgtaaaaagtaa
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