Lagopus muta (rock ptarmigan): 125702974
Help
Entry
125702974 CDS
T09141
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125702974 (MED13)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125702974 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
125702974
NCBI-ProteinID:
XP_048822843
LinkDB
All DBs
Position
20:complement(2461659..2510928)
Genome browser
AA seq
2200 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQADAGYALEDKGVMGPESVILSPFGLNGTLTGQSFK
LSDSSTKKLIGEWKQFYPVTSNLKEGSEEKQEDMDWEDDSLAAVEVLVAGVRMVYPACFV
LVPQTDIPAPSTAGTSHCSTTCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQ
KWVKFSSVSDGFISDSTSHHGGKIPRKLANQVVDRVWQECNMNRTQNKRKYSATSNSLCD
EETADKVASWDFVEATQRTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQD
KGDKPQKRPLTPFHHRVSISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMH
NAEMHNAEMANSPQPPPLSPHPCDVVDEGVTKAPSTPQSQHFYQMPTPDPLVPAKAMEDR
LDGLSQPFPAQFPEVIEPTMYVGTAVNLEEDEADTTWKYYKVPKKKDMEFLPPQLPNDKL
RDDPVIPAGQENVTSVTELMVQCRKPLKVSDELVQQYQSKNQYLAAVVSEADQEPEIDPY
AFVEGDVEFLFPDSKKDRQNIERETGKKHKAEDGTSGVTVLSHEGEDAMSLFSPSVKQDA
QRIAAHARTASTSLIHETDLVVSYTDLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKA
GNLDPLSCISTADLHKMYPTPPSLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSSM
GAQFRIEVDEGFCSPKPAEIKDYSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEE
CIYRQSWTVGKLDLLPPGPAMPFIKDGDGSTMDQEYGPAYTPQTHTPFGMPPGSAPPSNG
GAGILPSPSTPRFPTPRTPRTPRTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNS
VEPATVPSIPEAHSLYVNLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQ
EAQYRCTCGFSAVMNRKFGNSSGLFLEDELDILGRNTECGKEAEKRFEALRATSVEHGSA
GLKEPEKLPDELILLLQDQCTNLFSPFGAADQDPIPKVGAVSNLVRVEERDCCNDCYLAL
EHGRQFMDNMSGGKVDEALVKTTCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQ
KKRTVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPY
WERLMLEPYGSQRDVAYVVVCPENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDG
IMRVGPTASKKLSEKLVTEWFSQTANANSEAFSKLKLYAQVCRYELGPYLASQPLDNSLL
AQINLVPPSSQPASALPPVTASTGNPNTPSAPAASTSSTMTATSNSAMSSAATTANSTLT
TTATSSSSANIGSGIPTNKPSSFPPFSSMNNTTSASLPSQAATVQNGQTGGQQQQPVLQT
AGMSGDATAAPAQPHPEVSESTMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDE
NSSSSSLWTLGLLRCFLEMVQVLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSL
AFSAFTQCRRPLPSSTNVKTLTGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQT
ELGETFGEAGQKYNVLFVGYCLSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGS
ARRLGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKD
MCRMCGISAADSPSILSACLVAMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQD
TSCTHILVFPTSASVQVASSTYTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINI
LPASPTGSPVHSPGSHYPHGGDMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKA
GPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVL
EQYNALSWLTCDPATQDRRSCLPIHFVVLNQLYNFIMNML
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatacgtatggcagggtccaacatct
gcccccattctctttccggtcacggaagaggaccctattttgagcagcttcagtcgctgt
ctgaaggcggatgtgctcagtgtttggcgccgagaccagaggcctggacgcagggagctg
tggatattttggtggggtgatgaccccaactttgctgaccttatccatcatgatctctca
gaagaagaagatggtgtttgggagaatggactttcttatgaatgtcgcacgctgcttttc
aaagctgttcacaacctgttggagaggtgcttaatgaacaggaactttgtgcgcattggg
aaatggtttgtgaagccttatgagaaagatgaaaaacctataaacaaaagcgagcacttg
tcctgctcattcaccttcttcttacatggggatagtaatgtttgcaccagtgtggagatc
agtcagcatcaacctgtgtatctgcttagtgaagaacacctcacccttgcccagcagtct
aacagcccttttcaagcagatgcaggctatgctctcgaagacaaaggagtgatggggcct
gagtctgttattctaagtccctttggattaaatggcacgctcacagggcagtcattcaag
ctctctgattcatctaccaaaaagcttattggtgaatggaaacaattctatcctgtcact
tcgaacttgaaggaggggtctgaggaaaaacaagaagatatggattgggaggatgattct
ttagctgctgttgaagtccttgttgctggtgtgcgaatggtgtatccagcgtgcttcgtc
ctggttccccaaacagacatccctgctcccagcactgctgggacgtctcactgttcaact
acttgcttgggtgtccaccaagtgcctgcttccacacgagatcctgccatgtcctcagtc
actctgactcctccaacatcccccgaggaagttcaaacagttgatgctcagtctgcccag
aaatgggtgaagttttcttcagtttctgatggatttatctctgacagtactagccatcat
ggtggcaaaatacctagaaaactggccaatcaggtggtggacagagtttggcaagaatgc
aatatgaatagaactcagaacaagcggaaatattctgctacatcaaacagcttgtgtgat
gaggagacagctgacaaggtagcatcctgggattttgttgaagccacacagaggacaaat
tgcaattgttcaaggcacaaaaatctcaaaccaaggaattcaggtcaacaggggcaggca
ccacctgtgggccagcaacagcaagcagctccaaagcacaagacaaatgagaagcaagac
aaaggggataaaccacaaaaacgccctttgactccttttcatcatcgtgtatctatcagt
gatgatgttgccatggaggcagattcagcaagtcagaggcttgtgatgactgcaccagac
agtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcctcagatgcat
aatgctgagatgcataatgctgaaatggcaaattcacctcagccaccaccacttagtcct
cacccatgtgatgtagttgatgaaggggtaactaaagctccttctactcctcagagtcaa
catttctaccagatgccaacgccagatcccttggttcccgcaaaagcaatggaagacaga
cttgatggcttgtctcagccttttccagctcaattccctgaagttatagagcctacaatg
tatgttggtactgcagtgaatttggaggaagatgaagctgatactacttggaaatattac
aaagttccaaagaaaaaggatatggaattcttaccacctcagcttccaaatgataagttg
agagatgatccagtaatacctgctggacaggagaacgtaacatcagttacagaattaatg
gtgcaatgtaggaagcctttaaaggtttcggatgaactggtgcagcagtatcagagtaaa
aaccagtacctagcagcagtagtgtcagaagctgaccaggaacctgaaattgatccttat
gccttcgttgaaggtgacgtggagttcttatttcctgacagcaaaaaagaccgacagaac
attgagagggaaactgggaagaaacacaaggctgaggacggtacgtctggtgttacagtt
ctgtcccatgaaggagaggatgctatgtctttgtttagtccttctgtcaaacaagatgcc
caacgtattgctgctcatgctcgcactgcatcaaccagcctgatccatgaaacagacctg
gtggtctcttacactgaccttgacaatctcttcaattctgatgaggatgagctaacacct
ggatctaaaagaacagtgaatggtgctgatgacaaatccaactgcaaagaggcaaaagca
ggaaatttagatccactgtcatgcataagcactgcagatctccataaaatgtatccaact
ccaccttctttggaacaacacatcatgggattttctccaatgaacatgaataacaaggaa
tatggcagtatggacactacacttggaggaacagtacttgaagggaatagttccagtatg
ggagctcaattcaggattgaagtagatgagggtttttgcagccccaaacctgctgaaata
aaggattattcttatgtttataaacctgagaactgccaagccttagtgggatgttccatg
tttgcaccactgaaaacacttcccagccagtgtctccctcccatcaaactgccagaagag
tgcatatatcgccagagctggactgtgggaaagctggatttgcttcctccaggacctgcc
atgccatttatcaaagatggtgacggaagcactatggatcaagagtatggccctgcatac
acaccgcagactcatactccgtttggaatgcccccgggtagcgcaccacccagcaatggt
ggagctgggattctcccttctccttccacccctcgtttcccaactcccaggacaccaagg
actcctcggactcctcgtggagctggtgggccggcgagcgcgcaggggtcagtcaaatac
gagaactctgatttgtactcaccagcttccacgccatcgacgtgtagaccacttaactct
gttgaacctgcaactgtgccttccatcccagaggcacacagtctgtacgtgaatctcatc
ctctcagagtctgtcatgaacctcttcaaagactgtaactttgacagctgctgcatatgc
gtttgcaatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacacaa
gaggcccagtatcggtgtacctgtggtttcagtgctgttatgaataggaagtttggcaac
agttctggactgtttcttgaagatgaattagatattttaggtcgtaacacagagtgtggc
aaagaagcagaaaaacgctttgaagctctcagagctacttctgttgaacatggcagtgca
ggactgaaagaaccggagaaactgcctgatgagttaatactgttgctgcaagatcaatgc
accaacttgttctcaccatttggagcagcagatcaagatcctattcccaaagtcggtgca
gttagcaacctggtacgcgtagaagaaagggattgttgcaatgactgctacttagccttg
gaacatggacgccagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtg
aaaactacttgcttgcaccactggtcaaaaagaaacgttgtggacgtgagcatgcagtgt
tcccaggacatccttcgtatgctgctctcactgcagcccgttcttcaagacgccattcag
aagaagcgcacggtccggtcgtggggtgtgcaaggccccctcacgtggcagcagttccac
aaaatggctggcagaggctcttatggaactgatgagtccccagaaccgctgccaatccca
acgtttttgttgggctacgattacgatttcctggtgctgtctccgtttgcgctgccgtac
tgggagaggctgatgctggaaccttatggatctcaaagagatgttgcttatgttgtggtg
tgccctgagaacgaggctctgctaaatggagcaaaaagcttctttagggatctgactgca
atatacgagtcatgcagacttggccagcatagacctatctgtaaattattgcctgatgga
atcatgagagttggaccaactgcttcaaagaaactttctgagaagctggtcacagaatgg
ttctcacagacagcgaatgccaacagtgaagcgttttccaaactcaaactgtatgcccaa
gtttgcagatatgagctgggtccttatcttgcttctcagcctttggacaattcgttactt
gcccaaataaatctggtccctccctctagccagccagcctctgccctgcccccagtgaca
gccagcactggaaatcccaacactccatctgctcctgcagcttctaccagtagtaccatg
acagcaacgtcaaacagtgccatgtcttctgcagctaccacagctaactcaactttgact
accactgccacgtcgtcctcgtctgctaacataggcagtgggatcccaacaaacaagcct
tcttcatttccaccttttagcagtatgaacaataccacttctgcttccctgccctctcag
gctgcaacggtccaaaatgggcaaacaggagggcagcagcaacagccggtgctgcaaacg
gcagggatgtctggagatgctactgcagcacctgcacagccccacccggaggtttctgaa
agcactatggatcgtgataaagttggagttcctactgatggagattcacatgctatcacc
tacccacctgccattgtagtttacataatcgatcctttcacatatgaaaaaaaggatgag
aacagtagctcatctagtctgtggacacttggacttctgcgctgctttttagagatggtt
caggttcttcctcctaacatcaagaatataatttctgtgcagatcgttccatgtcagtac
cttctgcagcctgtgaagcacgaagaccggcagatttacactcagcatttgaagtcttta
gcattttcagcatttactcagtgtcggagacctcttccatcttccaccaacgtgaaaacg
ttaactggctttggcccaggcttagccatggaaacggctcttaagagccctgatagacct
gagtgtattcgactgtacacccctccttttatattggctcctgtaaaggacaagcaaaca
gagcttggagaaacttttggagaagctggccagaagtataacgtgctttttgtaggctac
tgtttgtctcatgatcaaagatggcttcttgcatcctgtacagatctctatggagaacag
ttagagacgtgcataataaatattgatgtaccaaacagagctcgcaggaaaaagggctct
gcccgcaggcttggtcttcagaaactctgggaatggtgcctgggactcgtgcagatgagt
tctttgccttggagagtcgtaataggccgcttaggaagaatagggcatggggaattgaaa
gactggagttgtttgttgagtcgccgaaatcttcagtccctcagtaagaggctgaaagac
atgtgcagaatgtgtggtatctctgctgcagactctcccagcattctcagtgcttgtttg
gtagcaatggaaccacaggggtccttcattattatgccagattctgtatcgacaggctct
gtgtttggacgcagcaccactttaaatatgcagacatctcagctgaataccccacaggac
acgtcgtgcactcacatacttgtgtttcccacatctgcttctgtgcaagtagcatcgtca
acttataccactgaaaatttggatctggccttcaacacaaacaatgatggagcagatgga
atgggcatctttgacttgttagacactggagatgatcttgatcctgatattataaatatt
cttcctgcatcccctactggatcccctgtacattctccagggtcccactacccccatgga
ggtgatatgggcaagggtcaaggtacagatcgattgctttcaacagaatctcacgacgaa
gtaacaaacatactgcagcagccactggcccttggttattttgtgtcaactgccaaagca
ggtcccttgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttg
tttcttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccac
agtaaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctg
gaacagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtca
tgtctcccgattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctg
tga
DBGET
integrated database retrieval system
