Loa loa (eye worm): LOAG_04347
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Entry
LOAG_04347 CDS
T02664
Name
(RefSeq) structure-specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
loa
Loa loa (eye worm)
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loa03000
]
LOAG_04347
03036 Chromosome and associated proteins [BR:
loa03036
]
LOAG_04347
Transcription factors [BR:
loa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
LOAG_04347
Chromosome and associated proteins [BR:
loa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
LOAG_04347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_box_2
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
9941751
NCBI-ProteinID:
XP_020303108
LinkDB
All DBs
AA seq
685 aa
AA seq
DB search
MTELEYNNVYQEHMGIMHQGRIKLGDSQINFKNTRNNRLQTIDSSEINKIDWMRVGNKPG
IRICLSSGIRHRFGGFSEKDFEEIKKFALDRWSIGVEQVEQCIKGWNYGRAEVKGQVLEF
EVDDKPCFEIPLNTVSNCTAGKSEAALEFHQNDDCSVSLMEMRFHIPTDPDADEDVDPVE
EFRRAVMQYAGIETETDQPVAILQQILCTTPRGRYDIKVYQNYLSLHGKTYDYKIPIRTI
MRLFLLPHKDGRHMYFVISLNPPIRQGQTRYHFLVLEFSKDEEVDLDLGLTSEQLKEQYK
GKLEKRMSGTVFEVVSKIFRVMVDMKITVPGSFVGHSGTPAVMCAHKQASGFLYPLEKGF
VYVHKPPMYIRFEEISCVNFARSDVSTRSFDFEIEMKGGSLLIFNSVEKEEYNRLFDFVN
NKHLRIKNAKRLDKPTYAENLADSDEELDPYKETLKQEARNKEAAESDDETDSEDHDYDL
EEDLKRKRSSTEESGSEPDEEYDSDSAQSSEGGSGDHKQKKSPKSKKKDLSKSTKAAKRE
KKKKDPNAPKKPQSAYFIWFGENYSSFKKEGVSVTEAAQKAGKMWKEIDEETKKKYEERA
KEDKERYAREMKEYMANGGPASSTASTSLTKKVKKPKPSSPVKLHSKPKSKEYISDTDSS
NESKKDKEEKDLKSESDESSNEDDD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacagaactggaatacaacaatgtatatcaagagcatatgggcataatgcatcaggga
cgcattaaattgggcgattcacaaataaattttaaaaataccagaaataaccgattgcaa
acaattgattcatcagaaattaataaaatagactggatgcgagttggaaataaacctggt
atacgaatatgcctatcttcgggaattcgtcatcgttttggtggattctctgaaaaggac
ttcgaagaaattaaaaaatttgcccttgataggtggagtattggtgttgagcaagttgag
caatgtatcaaaggttggaattatggaagagcggaagtgaagggtcaagtactcgaattt
gaagtggatgataagccatgcttcgaaatcccacttaacactgtaagtaattgtacggct
ggaaaaagtgaagcagctttggaattccatcaaaatgatgattgttctgtatcactgatg
gaaatgcgttttcatatcccaaccgatccagacgctgatgaagatgttgacccagtggag
gaattccgacgtgctgtaatgcaatatgctggaattgaaacggaaacagatcaaccggta
gcgattttacaacagattctctgcacaacacctcgtggtcgatacgatattaaagtctat
cagaattatttgtcgttgcatggtaaaacatatgattacaaaattccgattcgtacaata
atgaggctatttttattgcctcacaaagatggacgccatatgtatttcgtgatcagcttg
aatccaccgattcgccaaggtcaaactcgctatcactttttggttcttgaattctcgaaa
gacgaagaggttgatttggacttaggtcttacatctgagcagctaaaagagcagtacaag
gggaaactggaaaaacgaatgagcgggactgtctttgaagttgtatcaaagatatttcgg
gttatggttgatatgaaaattaccgttcccggaagctttgttgggcactctggaactcca
gcagtcatgtgtgctcacaagcaagcttcagggtttttgtatccattggaaaaggggttt
gtttatgttcacaaaccgccgatgtacattcgtttcgaagagataagttgcgttaatttt
gcccgatctgatgtatccactcgttcttttgatttcgaaattgagatgaaaggcggcagt
ttgctcattttcaacagtgttgaaaaagaagaatataatcgtctgttcgactttgttaac
aacaaacacttgagaatcaaaaatgcgaagcgactggataaaccaacgtatgcagaaaat
cttgctgatagtgacgaagagttggatccgtacaaagagacgctgaagcaagaagcaaga
aataaagaagcagcagaaagcgatgatgaaaccgacagtgaagatcatgattatgatctc
gaggaagatttgaagagaaaacgaagttcaacagaagaatcaggaagtgaaccagatgaa
gaatacgacagtgattctgctcaatcatcggaaggtggttctggtgatcacaaacaaaag
aaatctccaaaatctaagaaaaaggatttatcaaaatctacaaaagctgctaagcgtgaa
aaaaagaaaaaagatccaaatgctccgaagaaacctcagtcagcgtatttcatttggttt
ggtgaaaattactcaagttttaagaaggaaggagtctctgtgacggaggcagcccaaaag
gctggcaaaatgtggaaagaaattgacgaggaaactaagaagaaatatgaggaaagagcg
aaagaagataaagaaagatatgctcgcgagatgaaagaatatatggcaaatggaggacct
gcatcttcaaccgcatcaacaagtctaactaagaaagtaaaaaagccaaaaccaagttcg
cccgtgaaactgcattcgaagccgaaatcaaaggaatatattagtgatacagacagcagc
aacgaatcaaagaaggataaggaagagaaggacctcaaatcggaaagtgatgagagcagt
aatgaagatgacgattga
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