Lepisosteus oculatus (spotted gar): 102683083
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Entry
102683083 CDS
T07349
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12006
tripartite motif-containing protein 16
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102683083
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102683083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
DUF5446
Y1_Tnp
SRPRB
MTR4-like_stalk
PI3K_P85_iSH2
DUF677
TMF_TATA_bd
USP8_interact
Wtap
Motif
Other DBs
NCBI-GeneID:
102683083
NCBI-ProteinID:
XP_015195272
Ensembl:
ENSLOCG00000000166
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MKEIKQLGATQTQTQQRLQEREKELQELRQAVESLRSSAHTAVQDTDRIFTELIRFIERT
RSEVTQLIRAQERAAVSQAEGLLEQLEKEITELKRRDSELNQLSHTEDHIHFLQNFQSVC
VPLGAGDSPSIPVSPHFSPEAVRRAVSGLKERLEDLCKKESIKISTTVTEVYSLLTPEPG
SRAELLHYPVKRVPLPKSQWQWLCSAAAVVTLDPDTAHCELSLSEDGKRVRWGQRKSLSD
NPHRFDLYPCVVSREAFTSRRHYWEVEVNRYWRIGVTRESAERKGWISSSPQQGYWCLDS
YLSVFSALTAPVIPLPLSLWPRKLGVCVDIEERKVSFYTVESRAHLYTFTDMVFAQGEKI
YPVFCTEDSDKDLELLPAVSLEINPVTDS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaattaagcagctgggggcgacacagacacaaacccagcagagactacaggag
agagagaaggaactgcaggaactgagacaggctgtggagtcactcagaagctctgcacac
acagcagtacaggacactgacaggatctttactgagctgatccgcttcattgagagaaca
cgctctgaggtcacacagctgatcagagctcaagagagggctgcagtgagtcaggctgaa
ggacttctagagcaactggagaaggagattactgagctgaagaggagagactctgagctg
aaccagctctcacacacagaggatcacatccatttcctccagaatttccagtctgtctgt
gtccctcttggagctggagactcacccagcatccctgtcagtccacacttctctcctgag
gcagtgaggagagctgtctctggactgaaagagcgactggaggatctctgcaagaaggaa
tcaataaagatttccacaacagtgactgaagtctacagtctgctgactccagagcccggg
tccagagcagagcttttacactatcctgtgaagcgagttcctctacctaaatcacagtgg
cagtggctgtgcagtgctgcagctgttgtgactctggacccagatacagctcactgtgag
ctcagcctgtctgaggatgggaagagagtgagatggggacagaggaagagtctctctgac
aatcctcacagatttgatctctatccctgtgttgtgagcagggaggccttcacctcaagg
agacactactgggaggttgaggtgaatcgatactggagaataggagtgaccagagagtca
gcagagaggaaaggatggatcagctcctctccccagcagggttactggtgtctggactct
tacctgtctgttttctctgctctcactgcccctgtgatccctctccccctcagtctgtgg
cccaggaagctgggggtgtgtgtggatattgaggagaggaaggtctccttttacacagtg
gagtccagagctcatctctacactttcactgacatggtcttcgctcagggggagaagatc
tatcctgtcttctgtacggaggattcagataaagaccttgagctgctgcctgctgtcagt
ttggagattaatcccgtcactgactcatga
DBGET
integrated database retrieval system
