Lepisosteus oculatus (spotted gar): 102684178
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Entry
102684178 CDS
T07349
Symbol
trim62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102684178 (trim62)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102684178 (trim62)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102684178 (trim62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
CorA
zf-RING_5
zf-RING_10
KxDL
Spc24
U-box
ATG17_like
Fib_alpha
DUF6872
Phasin
zf-Nse
DUF2884
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
102684178
NCBI-ProteinID:
XP_006641926
Ensembl:
ENSLOCG00000001163
UniProt:
W5LYW3
LinkDB
All DBs
Position
LG25:2087849..2178649
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AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHGARDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRNSYPCKDHEKVKLFCLSDKTLVCFFCDEPAVH
EQHQVTTIDEAFEEIQREMKEQLVALQDSEVGHTEALKLLQRQLTETKSSAKGLRATIGE
AFERLHRFLRERQKAMLEELEQDTARTLSDIEQKIQRYSQQLRDVKEGIQILQERLSETD
RHGFLEGVALTSERIKGKIHETNLSYEDFPTSKYMGPLQYTIWKSLYQDVSPVPAALTLD
PITAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEGFGAGVHYWEVMVSEK
TQWMIGVAHEAVSRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKSKLEKVGVYL
DYPKGLLVFYNADDMSWLYTFREKFPGKLYPYFSPGQSHANGKNVQPLRINTVRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcagtctgaaggacgagcttctgtgctccatctgcctgagtatttaccaagac
cccgtcagcttcgggtgcgagcactacttctgcaggaagtgcatcacggagcattggagc
agacaggagccccacggagcccgggactgtccggagtgccgccgcaccttcgccgacccg
ctcctgtcccccagcctcaagctctccaacatcgtggagaggtactccgccttcccgctc
gacgccatcctcaatgcccagaggaactcgtacccctgcaaggaccacgagaaggtcaag
ctcttctgcctcagtgacaagacgctggtctgcttcttctgcgacgagccggccgtccac
gagcagcaccaggtcaccaccatcgacgaggcgttcgaagaaatccagagggagatgaag
gagcagctggtcgctcttcaggacagtgaggttggacacacagaggccctgaagcttctc
cagagacagctcaccgagaccaagtcgtcggcgaagggtctgcgagcgacgatcggcgag
gccttcgagcggctccaccgcttcctgagggagcggcagaaggccatgctggaggagctg
gagcaggacaccgcccgcacgctgtccgacatcgagcagaagatccagcgctacagtcag
cagctgcgtgatgtcaaggaggggatccagatcctgcaggagcggctgagcgaaactgac
cgccacggcttcttggagggcgtcgcgctgacctctgaaagaattaaagggaagatccat
gaaaccaacctttcctatgaagatttcccaacatccaagtacatgggacccctgcagtac
accatctggaaatctctctaccaggacgtttcaccagtgcctgcggccctgaccctcgac
cccatcaccgcccaccagcgcctcatcctgtccgacgactgcaccatcgtggcgtacggc
aacctgcacccccagcccctgcaggactcgccgcggcgcttcgatgtggaggtgtccgtg
ctgggggcggagggcttcggcgccggcgtgcactactgggaggtgatggtgtcggagaag
acgcagtggatgatcggcgtggcccacgaggctgtcagccgcaagggcagcatccagatc
cagcccagccgcggcttctactgcatcgtcatgcacgacggcaaccagtacagcgcctgc
accgagccctggacccgcctcaacgtcaagagcaagctggagaaggtgggcgtctacctg
gactatcccaagggcctcctggtcttctacaacgccgatgacatgtcctggctctacacc
ttccgggagaaattccccggcaagctctatccctacttcagtcccgggcagagccacgca
aatggcaaaaacgtccagcccctgcgaatcaacacggttcgcttgtag
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