Lepisosteus oculatus (spotted gar): 102685842
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Entry
102685842 CDS
T07349
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102685842 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102685842 (crnkl1)
03036 Chromosome and associated proteins [BR:
loc03036
]
102685842 (crnkl1)
Spliceosome [BR:
loc03041
]
Complex B
Other components
Prp19-related factors
102685842 (crnkl1)
Complex C
102685842 (crnkl1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102685842 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
TPR_19
Suf
TPR_17
Mad3_BUB1_I
TPR_12
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
102685842
NCBI-ProteinID:
XP_006626265
Ensembl:
ENSLOCG00000016889
UniProt:
W5NJR7
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All DBs
Position
LG1:51379259..51389690
Genome browser
AA seq
720 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPD
EQAWHSYINFELRYKEVDKARFIYETFVIVHPEVKNWIKYARFEEKHGYIGHSRKVFERA
VEFFGEEHVDEHLYVAFAKFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANIP
PIPEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLCAQF
EIRQKNLPFARRALGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDVDRARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYGKTRDLYRRL
LQRTQHVKVWISYAQFELSVESEDRLIKCRQIYEEANKALRNCEEKEERLMLLESWRDFE
AEFGTDSTRSRVHRLLPEKVKKRRKLQAEDGSDAGWEEYYDYIFPEDSANQPNLKLLAMA
KMWKKQQQQEEEEDSQEDSQEQQEQEDPAAVTAGDDKDDGDNDRQDNDEDKDKDEDSNKS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaccgcggctgggaagcaaaggataccgaaagtggctaaggtgaaaaacaag
gcccccgccgaggtgcagatcacggcggagcagctgctcagggaagccaaagagagggag
cttgagcttctgcccccgccgcccaagcagaagatcaccgacgaggaggagctgaatgat
tacaagctgcggaaaagaaagggatttgaagacaacatccgaaaaaatcgcactgtcatc
agtaactggataaagtatgcacaatgggaggagagcctgaaggaagttcagagagcccgc
tccatttacgagcgtgccctagatgtggaccacaggaacatcgcgctgtggctgaagtat
gccgagatggagatgaaaaaccggcaggtgaaccatgcccgcaacatctgggaccgagcc
atcaccatcctcccgcgggtcaaccagttctggtacaaatacacctacatggaggagatg
ttgggaaacgtagccggctgtcggcaggtgtttgaacggtggatggagtgggaacctgat
gagcaagcctggcattcctacattaactttgaactgcgctacaaagaagtggacaaggca
cgcttcatttacgagacatttgtaattgtccaccctgaagtgaagaactggatcaagtac
gcccgcttcgaagagaagcatggctacattggccattccaggaaggtgtttgagagagcc
gtggaattctttggggaggaacacgtcgatgagcatctctacgtggcttttgcaaagttt
gaggagaaacagaaagagtttgagcgagtgcgggtgatctacaagtatgccctggatagg
attcctaagcagcaagcccaggagctgttcaaaaactacactgttttcgagaagaagttt
ggagataggaggggaatcgaagatgtcatcgtcagcaaaagacgtttccagtatgaggag
gaagtcaaggcaaaccctcataactacgatgcctggtttgattacctccgactggtagag
agtgacgcagacgctgacacggttcgagaggtgtatgaaagagccattgccaacatcccc
cccatcccggaaaaaaggcactggagaagatacatttacctctggattaactatgccttg
tacgaagaattggaggtcaaggacccagaaagaacaagacaagtgtaccaggcatgtctt
gaactcattccacacaaaaagtttacatttgccaaaatctggttattatgtgcccagttt
gaaataagacagaagaatcttccttttgctaggagggctctgggcacaggcattggtaaa
tgcccaaagaacaaactatttaagggctatattgagctggaactacagcttcgagagttt
gatcgttgccgaaaactctatgagaagtatctggaattttccccagagaactgtacgacg
tggatcaaatttgccgagctcgagactatcttgggagatgtagacagagctcgtgcaatc
tttgaactcgctataggacagcccagactggatatgccagaggtgctttggaaatcgtac
attgactttgaaattgaacaagaggaatatggaaagacgagagacctgtacaggaggtta
ctacagcgcactcagcatgttaaggtttggatcagttacgcccagtttgagctatctgtc
gagagtgaggatcgcctgatcaagtgcagacagatttacgaggaggccaacaaagccctg
cgcaactgtgaggagaaagaggaaagactcatgttactggagtcctggagggactttgag
gccgagttcggtaccgacagcacacggagcagagtgcacaggcttctcccagagaaagtc
aagaagaggagaaagctgcaagcagaggatggctcagacgccggctgggaagagtactat
gactatatctttccagaggattctgccaaccagcccaacctcaagctgcttgccatggcg
aaaatgtggaagaaacagcagcaacaggaggaggaagaggacagtcaggaagactcgcag
gagcagcaggaacaggaggacccagcggctgttactgctggtgatgacaaggatgatggt
gataacgacaggcaggataatgatgaagataaggataaggatgaggacagcaataaatcc
taa
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