Lepisosteus oculatus (spotted gar): 102687000
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Entry
102687000 CDS
T07349
Symbol
lman1
Name
(RefSeq) protein ERGIC-53 isoform X1
KO
K10080
lectin, mannose-binding 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102687000 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102687000 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
loc04091
]
102687000 (lman1)
Membrane trafficking [BR:
loc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
102687000 (lman1)
Lectins [BR:
loc04091
]
L-type lectins
102687000 (lman1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
GCN5L1
V-SNARE
JSRP
SIP1
IMD
OmpH
Motif
Other DBs
NCBI-GeneID:
102687000
NCBI-ProteinID:
XP_006627204
Ensembl:
ENSLOCG00000011935
UniProt:
W5N223
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All DBs
Position
LG2:complement(49484840..49503933)
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AA seq
503 aa
AA seq
DB search
MAVSIEKCLIVATRLLILTLIFHLVSADVVQSSQDSPHRRFEYKYSFKGPHLAQSDGTIP
FWVHTGNAIPSSDQIRITPSLRSQKGSVWTKNTAAFENWEVEVTFRVSGRGRLGADGLAI
WYTSEQGLDGPVFGAADLWNGLGIFFDSFDNDGKKNNPAVLIVGNNGKLIYDHQNDGSTQ
ALGTCLRDFRNKPYPVRAKITYYQKSLTVMINNGFTPDKDDYEFCAKIENMHIPREGHFG
ISAATGGLADDHDVLSFLTFRLTEPGQKPPPPEAEIPKEEKDKYQEEFESFRQELDKKKE
EFQKEHPDVQGEAVEDLYESVNDREIRQVFEGQNRIHLEIKQLHRQLSMILDEQRRYVSV
VTDEISRRGAQGQPGQIPTQELDTIVTTQQEVMKSLNEIRGSLSDTMRQVGSVHNQGNSA
GTYETVQHFNDIKEHIHLVKRDLDHLIQRNGGPGEKTKCPDIPPFPSCLSTAHFIMFVAA
QTVLFIGYIMYRSRQEAAAKKFF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatagaaaagtgcttgattgtagcaactaggttattaatattaacttta
atatttcacctggtttctgcggacgttgttcagagctcccaggactcgccacatcgccgg
tttgaatacaaatacagtttcaaaggacctcatcttgcgcagagcgacggtactattcct
ttttgggtgcacactggaaatgccatcccaagctcagatcaaatccgcatcaccccatct
ctgagaagccagaaagggtctgtgtggacaaaaaacacagctgcatttgaaaactgggag
gtggaagtaacattcagagtgtctggcagaggtcggctgggagctgatgggcttgcaatc
tggtacacatcagagcaagggcttgatggtccagtctttggagcagctgacctatggaat
ggactcggaattttctttgattctttcgataatgatgggaagaaaaacaaccctgctgtt
cttatagttggaaacaacggaaagctaatttatgatcatcagaatgatggttcaactcaa
gccctgggaacatgcctgagagacttccgaaacaagccctatccagtcagagccaaaatc
acatactaccagaagtcattgacggttatgataaacaatggctttactccagataaggat
gattatgaattctgtgccaaaattgaaaatatgcatatcccaagggaagggcattttggg
atttcagcagctacaggagggctggctgatgatcatgatgtgctgtccttcttgacattc
agattaacagaaccaggacaaaaaccgcctcctccagaagctgaaattcctaaagaagaa
aaggacaagtatcaagaggagttcgaaagctttcgacaggagcttgacaagaagaaggaa
gaatttcagaaagaacatccagatgtccaaggagaagctgtagaggacctgtacgagagt
gtgaatgacagagagattcggcaggtgtttgaaggccaaaacaggatccatctggagatc
aagcagttgcaccgtcagctaagcatgattctggatgagcagaggcgatatgtgtctgtg
gtcactgacgagatcagccgaaggggagcgcagggacagccaggacagattcccactcaa
gaacttgacacaatagttacaacgcaacaagaagtgatgaaaagcctaaatgagatcagg
ggttctttgtcggatacaatgagacaagtgggctctgtccataaccaagggaactcagca
ggaacctatgagactgtccagcacttcaatgacattaaggagcacattcatttggtgaaa
agagaccttgaccatttaatacagcgtaatggggggccaggtgaaaagactaaatgccca
gacattcctccattcccatcatgcctttccactgctcacttcatcatgtttgttgcggct
cagacggtcttgttcattggttacataatgtacagaagtcgacaagaagcagctgccaag
aagtttttttga
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