Lepisosteus oculatus (spotted gar): 102687003
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Entry
102687003 CDS
T07349
Symbol
dscam
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
loc04515
]
102687003 (dscam)
Cell adhesion molecules [BR:
loc04515
]
Immunoglobulin superfamily
DSCAM family
102687003 (dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Interfer-bind
V-set_CD47
C1-set
Sp38
fn3_2
Psg1
DUF6377
DUF4381
Motif
Other DBs
NCBI-GeneID:
102687003
NCBI-ProteinID:
XP_015197155
Ensembl:
ENSLOCG00000001471
LinkDB
All DBs
Position
LG3:777377..943871
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AA seq
2095 aa
AA seq
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MYESQLRGTDPASRYAAVAVGRSGSAGSHGSGTALITAGPRLVLPALRSDLGDRGDDGPW
SPDKPNTPAPLRAVKETAFRLFRRLTRWCFSAVPHDYAEPACMVFSEDLLSSLYFVNASL
QEVVFASTTGTLVPCPAAGVPPATLRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSF
SNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYGVRVEDQKAMRGNVAVFKCIIRALV
EAYITVVSWEKDTVSIVSGSRFLITSTGALYILDVQNEDGLCNYRCITRHRYTGETRQSN
SARLFVSDPTNSEPVILDGFDRREVMATQRVELPCKASGHPAPKYRWLKDNNPLEPDSRF
RQSVSGLLIESARPGDSGNYVCEVWNSYGNAAVVGRLVVKQPLKVVVSPRKVKGSVGSQV
SLSCSVSGAEDHELSWYRNGEVIHPGNSVRIAGSNRETLVMEGMAKSDGGAYQCFARKDK
MSAQDFVQVVLEDGTPKILSAFSEKVVSPNELVSLVCNVKGTPLPTVTWTLDDEPIVKDS
SHRVSQVITSEGNVLSYLNITSTHVRDGGVYRCTANNSAGVVTYQARINVRGPASIRPMK
NITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQGAFENNGTLKLSDVQKEVDEG
EYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQ
KDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIASNDAAAVEHQSQLIVRVPPR
FVVQPGDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQLLGNGSL
LIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTSLATQGQKKEMSCSA
HGEKPIIVRWEKEDRIINPEMSRYVVSTKEVGEEVISKLQILPTVREDSGFFSCHAINSY
GEDRGIIQLTVQEPPDPPEVEIRDVRDRSIALRWTMGFDGNSPITGYDIECKNKSDSWDS
VQRTKDVSPQLNQATIIELHPSSTYSIRMYAKNRIGKSEASNELTITTEEAAPDGPPQDV
QLDPISSQSIKVTWKAPKKHLQNGMIRGYQIGYREYSTGGNYQFKIKNIETTGDSEVHTL
DNLKKFTQYGVVVQACNRAGTGPSSQELIVTTLEDVPSRPPENMQGTATSPETISLSWST
PPKEALNGILQGFRVIYWANLPDGELGEIRNVTTTQPSLELDGLEKYTNYSIQVLAFTRA
GDGVRSEQIFIRTKEDVPGPPGGVKAAAASNSVVFVSWLPPLKLNGIIRKYTLVCSNPYP
TVISEFEASPDVFFYRIPNLTRNRQYSIWVVAVTAAGRGNASDIVTVEPLAKAPARILTF
SGTVTTPWMRDIVLPCKAVGDPPPTVKWLKESNGTPAPVLIDGRRSIYGNGSFVIRTVKA
EDSGYYSCVASNNWGSDQIVLNLQVQVPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRG
YILQHSEDNSEQWDSLPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTH
GKEPQFSKEQELFASINSTCVRLNLIGWNDGGCPISSFILEYRPVDTTVWTTAQKTTPPK
SYALSDLQEATWYELQMRVTNSAGFAEKKVKFATLNYDGSTIPPLTKTVDESKDSLSSNE
GLKMMVTISCILVGIVLLFVLLVVLRRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNK
QQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGETSKQKSSTVTHTVHYQSL
SQATGPLVDVSDARPGTNPTARRNAKAGPTARNRYASQWTLNRPHPTISAHTLTTDWRLP
TPRAAGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAK
FTITECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPK
AHRPGGDLMHLPPYLRMDFLLNRGVAGAGRDLGLGPACLEPQKSRTLKRPAILEPTPTEP
TVQQWQPGTASTLPQRDGADLGQAAKMSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaagccaattgcgaggcaccgatcccgcaagccggtacgcggctgtagccgtg
ggcaggagcgggagtgccggctcgcacgggtcggggacggccttaattaccgcaggtccg
agactggtgctgcctgcgctgcgctctgatctgggtgacaggggagacgatgggccgtgg
tcacctgacaagccaaacacccctgctccactccgtgctgttaaagagacggctttccgc
ctctttcggcgtttgacgcgttggtgtttctctgcagttcctcacgattatgccgaacca
gcgtgcatggttttcagtgaagacctactttccagcttgtacttcgtcaatgcatctctg
caagaggtagtgtttgcgagcaccacagggaccctggtgccctgtcccgcagcaggcgtg
cccccggcaacgctccgctggtacctagcaacgggcgaggagatctacgatgttccaggg
atccgccacgtccacccaaacggcactctccaaatcttccccttccctccttcaagcttt
agtaacctaatccatgataacacttactattgcacagcagaaaatccttcagggaaaatt
agaagccaagatgttcatattaaggccgttctacgggagccctatggtgtccgagtcgag
gaccagaaagccatgagaggcaatgtagcggtcttcaagtgcattatccgggccttagtg
gaggcctacatcactgttgtgtcatgggagaaagacacagtctcaattgtctcaggatct
agatttctcatcacatccacgggagccttgtacattctggatgtccagaatgaagatgga
ttgtgtaactaccgttgcatcacacggcatcgctacactggggagaccaggcagagcaac
agcgctcgcctcttcgtgtcagacccaacgaactccgaaccggtgatcctcgatggcttc
gaccggcgggaggtgatggccacgcagcgggtggagctcccgtgcaaagcctccggacac
ccagcgcccaagtaccgctggctgaaggacaacaaccccctggagccggacagccgcttc
cggcagagcgtctcgggcctgctgatcgagagcgcgcggcccggcgactccgggaactac
gtgtgcgaggtgtggaacagctacggcaatgcggccgtcgtgggacggctggtggtgaag
cagcccctgaaggtggtcgtcagtccccgcaaggtgaagggcagtgtggggagccaggtg
tccctgtcgtgcagcgtgagcggcgccgaggaccatgagctctcctggtaccgcaatggg
gaggtcatccacccaggcaacagcgtgaggatcgcgggcagcaaccgcgagaccctggtg
atggagggcatggccaagagcgacgggggcgcctaccagtgctttgccaggaaggacaaa
atgtcggcccaggacttcgtgcaggtcgttctggaagatggaaccccgaagatcctgtcg
gcgttcagcgagaaggtggtgagccccaacgagctggtgtccctcgtgtgcaacgtcaag
ggcacacccctgcccaccgtcacctggacgctggacgacgagcccatcgtgaaggacagc
agccaccgggtcagccaggtcatcacctccgagggcaacgtgctcagctacctgaacatc
accagcacccacgtgcgggacggcggagtctaccgctgcactgccaacaactcggccggc
gtggtcacctaccaggctcgaataaacgtaagagggcctgccagcatccggccaatgaaa
aacatcacagccattgctgggcgggacacgtacatccactgccgtgtgattggctacccc
tactactccatcaagtggtacaagaactccaacctgttgcccttcaatcaccgccagggt
gccttcgagaataacggcaccctgaagctgtcggacgtccagaaggaggtggatgaggga
gagtacacctgcaacgtgctggtccagccccagctatccacaagccagagcgtgcacgtc
accgtcaaagtcccccccttcatccagcccttcgagttcccacgcttctccatcggccag
cgcgtcttcatcccctgcgtggtggtctccggcgacctgcccatcaccatcacctggcag
aaggacggccggcccatccccgccagcctgggcgtcaccatcgacaacatcgacttcacc
agctccctgcgcatctccaacctctcgctgatgcacaacggcaactacacctgcatcgcc
agcaacgacgctgcggccgtggagcaccagagccagctgatcgtgagagtgcccccgagg
tttgtagtccagccaggcgatcaggatggaatctatggcaaggctgtgatcctgaactgc
tccgcggaaggctaccctgtgcccaccatcgtgtggaaatattccaaaggagccggcgtg
ccgcagttccagcccatcgccctgaacggccggatccagctgctggggaacggctccctg
ctgatcaagcacgtgctggaggaggacagcggctattacctgtgcaaggtcagcaacgac
gtgggagcagacgtcagcaagtccatgtacctcaccgtcaaaattccagccatgatcacc
tcctaccccaacacctccctggccacgcagggccagaagaaggagatgagctgcagtgct
catggggagaagcccatcatcgtccgctgggagaaggaggacagaatcatcaaccctgag
atgagccgctacgtcgtttccaccaaggaggtgggcgaagaggtcatctccaagttgcag
attttgccaacagtcagggaagattcagggtttttctcctgtcacgcaatcaactcctat
ggagaagacagaggcatcatccagctgacagtgcaggagccccctgaccctcccgaggtt
gagatccgggacgtccgggaccgcagcatcgccctgcgctggacaatgggcttcgacggg
aacagccccatcaccggctacgacatcgagtgcaagaacaaatcagactcctgggattca
gtgcagagaaccaaagatgtgtccccccagctgaaccaggcgaccatcatcgagctgcac
ccctcctccacctatagcatccgcatgtacgccaagaaccgtatcggcaagagcgaggcc
agcaacgagctcaccatcaccacagaggaagcagccccagatgggccaccccaggatgtg
caattggaccccatctcttctcagagcattaaggtcacctggaaggcgcccaagaagcac
ctgcagaacggcatgatccgtggataccagatcggctacagggagtacagcaccgggggc
aactaccagttcaagatcaagaacatcgagaccacgggggacagcgaggtgcacacgctg
gacaacctgaagaagttcacgcagtacggcgtggtggtgcaggcctgtaaccgcgccggc
accgggccgtcctctcaggagctcatcgtcaccacgctggaggacgtgcccagccgccca
ccagagaacatgcagggcacggccacatcccccgagaccatctctctgtcctggtcaaca
ccccccaaggaagcgctcaacggcatcctccagggcttccgggtcatctactgggccaac
ctgccggacggcgagctgggggagatcaggaatgtcaccaccacacagccctccctggag
ctggacggcctggagaaatacaccaactacagcatccaggtgctggccttcacccgcgcc
ggggacggcgtgcgcagcgagcagatcttcatccggaccaaagaggacgtgcccgggccg
ccagggggagtgaaagccgccgccgcctccaactccgtggtcttcgtctcctggctgccg
ccgctcaagctcaacggcatcatccggaagtacacgctcgtctgctccaacccctacccc
acggtgatcagcgaatttgaagcctctcctgatgtgtttttctaccgcatcccgaacctc
acccgcaaccggcagtacagcatctgggtcgtcgcggtgacggcagccggccgcggcaat
gccagcgacatcgtcactgttgagcctctcgctaaagctccggcccggatcctgacgttc
agtggcacggtgacaaccccctggatgcgagatattgtcttaccctgcaaggcggtggga
gacccgccccccactgtgaaatggctgaaagagagcaatgggactcctgctcctgtgctg
attgatgggcggcgcagtatctacggcaacggcagctttgtcatccggacagtgaaagca
gaggattctgggtactacagctgtgttgccagtaacaactggggttcagaccagattgtg
cttaacctgcaggttcaagttccaccggaccaaccgcgtctcaccgtctccaagacgacc
tcctcttccatcactctctcctggattcctggcgacaatggggggagctccatccgaggc
tatatcttgcagcactccgaggacaacagtgagcagtgggacagccttcccatcagcccc
agtgagcgctcgtaccggctggagaacctgaaatgtgggacgtggtacaagttcacgctg
acggcccagaatggagtgggcccaggccgcatcagtgagatcatcgaggccaagacccac
ggcaaagaaccccagttctcgaaggagcaggagctcttcgccagcatcaactccacctgc
gtgcggctgaacctgatcgggtggaatgatggcggctgccccatcagctccttcatcctg
gagtaccgccctgtggacaccacggtgtggaccacggcccagaagaccacgcctcccaag
agctacgccctgtctgacctgcaggaggcgacgtggtatgagctgcagatgagggtgacc
aacagtgccgggtttgccgagaagaaggtgaaattcgctacgctgaactacgatggcagc
accattcccccgctcaccaaaacggtcgatgagagcaaagacagcctgtccagcaacgag
ggtctgaagatgatggtcaccatatcctgcatcctggtgggcattgtgctgctcttcgtg
ctgctggttgtcctgaggaggaggaggagggagcagaggctcaagaggctcagggatgct
aaaagtctggcagaaatgctaatgagcaaaaacaccaggacatcagatacgctgaacaag
cagcagcagacactccggatgcacattgatatccccagagcccagctgctcattgaggag
agagacacgatggagacgatcgacgacaggtcgacggtgctgctcacagatgccgacttt
ggagagacatcgaagcagaaatcctccactgtcacacacactgtccattaccagtctctc
tctcaggctactgggccacttgtggacgtgtctgatgcccgacctggaacaaatcccaca
gcacgccggaacgccaaggcggggccgacagcccggaacaggtacgccagccagtggaca
ctgaaccggccccaccccacgatctccgcgcacaccctgaccacagactggaggctgccc
acccctcgggctgcaggctctgtggacaaagagagcgacagctacagcgtcagcccgtct
caggacacagaccgcgcacggagcagcatggtgtccacagagagcgcgtcctcaacctac
gaggagctggcccgcgcctacgagcacgccaagatggaggagcagctgagacacgcgaaa
ttcaccatcaccgagtgcttcatctcggacacctcctccgagcagctgactgcagggacc
aatgagtacaccgacagcctgacctccagcacgccctccgagtcgggcatctgccggttc
acagcgtcgcccccgaagccccaggacggggggagggtcatgaacatggctgtccccaag
gcacacagaccgggaggcgacctgatgcacctccccccgtacctgcgaatggactttctc
ttgaaccgcggcgtcgccggcgccggcagggacctgggactggggccggcctgtctggag
ccgcagaagagccgcacgctgaagcgtcccgccatcctggagcccacgcccacagagccc
accgtgcagcagtggcagccggggacggcctccacgctaccccagagggacggggcggac
ctgggacaggccgccaaaatgagcagctcccaggaatcgctgctggactcaagaggacac
ctgaaacaaagcaacaacccttacgcaaaatcctacaccttggtataa
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integrated database retrieval system
