Lepisosteus oculatus (spotted gar): 102690901
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Entry
102690901 CDS
T07349
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102690901 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102690901 (srf)
Transcription factors [BR:
loc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
102690901 (srf)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
102690901
NCBI-ProteinID:
XP_015218542
Ensembl:
ENSLOCG00000015887
LinkDB
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Position
LG16:5585137..5625158
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AA seq
639 aa
AA seq
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MLPSQAGSAPAGNGSSAGRGNTGHSSGAAGSALRPGLGRTGLIGVAAGVSGNGGGVGRSG
DGAGMLGGNGAGGGSRGGSRPGNGAGLAGLQGTGVGGIGGVTPAVGMHGAGRYEPERDST
PQVYSGSDADSDSGDDDDPLGPAGDGRRGVKRERAEMEAAGAGQETGVPPGAYGGVSAGV
AGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASET
GHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVS
ESDSCGETKAYGGAGAYGGHTAGWDPSPSWGSRAHTDTLKPAFTVASLPGTTSSNPTAPT
TSTTMQVSSGPSFPITNYLAPVSASGNTNSITSANGTVLKTTGSSGSVMQLPGGFFMSGT
TLPPGTPTIPIAQMQSHSLAIQGQQGQAITATASQAQQGQQAVFRFPATVSLTGGPVSQQ
IQAIQVHPSTQQSSASTSESGPEISQASTSSAVSLPATIVTSSVPTSMAGHMMYPSPHAV
MYASTPTLADGSLAVLNAFSQAPSAMQVSHTQSQEQGGVPQVFLTGPPGTVQIPVSAVQL
HPVRKDVYNMVLGQQPSSSSNLTELQVVNLDAPHNTKSD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggctgggtcggcaccagctggaaacgggtcgtctgcgggccggggc
aacacgggtcacagctcgggggcggccgggagcgcgctgcgcccgggtctgggcaggacg
gggttaatcggagtggcggccggggtcagcggcaacggcggcggggtgggacggtcgggg
gacggggcagggatgctggggggcaacggggcagggggaggctcccgaggagggtcccgg
ccgggcaacggggcagggctggccgggctgcaggggactggagtagggggcatcggggga
gtgacgcccgccgtcgggatgcacggggccgggaggtacgagcccgagcgggacagcacg
cctcaggtgtacagcggctcggacgccgactcggactccggggatgacgacgaccccctg
ggtccggccggggacggcaggagaggggtgaagcgggagcgggcggagatggaagccgcc
ggcgccgggcaggagaccggcgtgccgccgggggcatacggcggggtgtccgccggggtg
gccggcgcgaagccggggaagaagaccagggggcgagtcaagatcaaaatggagtttatc
gacaacaagctgaggcggtacacaactttcagcaagcggaagacgggcatcatgaagaag
gcgtacgagctgtcgacgctgacgggcactcaggtcctgctgctggtggcgagcgagacg
ggccacgtctacaccttcgccacgcggaagctgcagcccatgatcaccagcgagacgggg
aaggccctgatccagacctgcctgaactcccccgactcgccccctcgctcggaccccacc
accgaccagcggatgagcgccacgggcttcgaggagacggacctcacgtaccaggtgtcc
gagtccgacagctgtggagagacgaaggcttacgggggagccggagcctatgggggtcac
acagctggatgggatcctagtccatcatggggctctcgcgcacacacagacacactgaag
cccgccttcacagtggccagcctccctggcaccacctcttccaaccccacggcccccacc
acctccaccaccatgcaggtcagcagcggcccctccttccccatcaccaactacttggcg
cccgtctcggccagcggcaacaccaacagcatcaccagcgccaacggcacagtcctcaag
accacaggctcctcggggagcgtcatgcagctgcctgggggcttcttcatgtcaggcact
acacttccgcccggcacccccacgattcccattgcgcagatgcagtcccactctctggcc
atccagggccagcagggtcaggcgatcacagccacggcatcgcaggcacagcaagggcag
caggccgtcttccgcttccccgccacggtctctctcacaggaggaccggtgtctcagcag
atacaggcaatccaggtgcacccctccacacagcagagctcggccagcaccagtgaaagt
ggaccggagatctctcaggcctccaccagctctgcagtcagccttcccgccaccatcgtc
acctcctctgtacccacctccatggcaggtcacatgatgtaccccagcccccatgcggtc
atgtacgcctccacgcccacgctggcagacggcagtctggcggtgctcaacgccttctca
caggcaccctccgccatgcaggtctcccacacgcagagccaggagcaaggcggagtccct
caggttttcctcacaggacctccaggaacagtgcagatcccagtctccgctgtgcagcta
cacccagtacggaaagacgtatataatatggtgcttggccagcagcccagcagcagcagc
aacctgaccgagctgcaggtggtcaacctggatgccccccacaataccaaaagtgactga
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