Lepisosteus oculatus (spotted gar): 102694716
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Entry
102694716 CDS
T07349
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
loc01002
]
102694716 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102694716 (usp47)
Enzymes [BR:
loc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102694716 (usp47)
Peptidases and inhibitors [BR:
loc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102694716 (usp47)
Ubiquitin system [BR:
loc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102694716 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102694716
NCBI-ProteinID:
XP_015193745
Ensembl:
ENSLOCG00000004131
LinkDB
All DBs
Position
LG27:complement(8656492..8684358)
Genome browser
AA seq
1384 aa
AA seq
DB search
MLKVLQNLMSGLKPKKSFQLISPSQGKFWSCRQSIFDEMKKKFSQIENAADEPRVLCIIQ
DTTSAKSVNEKLTFNLPASTPLRKLFEDVASKAGYVNGTFDLTWGSGTDMAPLDHSSDSS
LAESGFEPGKKNFLHLTDKDGEQPQIASDESGTADSSGLDDSSQDRFIGPLPRDCTVGCS
SDYSSPSYSYSSILSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEE
DPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQ
KWKQTEQADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSNQAFGSVEEA
LQAFIQPETLDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLN
DRMTFPEELDMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICL
ENTSSTERSLKSKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQ
DDIRKTYGGTSGTRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLEVQDFPAHITRLVQKE
KDLEEQEKKQREIERNTCKIKLFCMHPVKMLMMENRLEVHKDKTLKEAVEIAYKLMDLDG
IVPLNCCRLVKYDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPY
KPGEVMVKVHVVDLKTEVIASPVSVRAYLNQTVTEFKQLISQATGLSAETMRIVLERCYN
DLRLLYVPNKTLKAEGFFRSNKVFVESSDSTDHQVTFTDSLLWKLLDRHGNTIRLFVSLP
EQSPGSHASRTLCQKGGGDSGHLEDNFEMVKGNRKSVEAILEESTEKLKNLSLQQQQGGG
NGDSLKSSDASDFEHIESPSQEADSSMSVDNRELENRIQTSDPENNFQSEERSDSDINND
RSTSSVDSDILSSSHSSDTLCNADNAPIPLANGLDSHSITCSRRSKANEGKKETWDTAEE
DSGTDSEYDENGKNKGETQYMYFRAEPYSADESSGERQKCLLVHVDKRITLVAFKQNLEP
FVGVPSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLL
VNDPEPCKFLVDAVFAKGMTVRQSKEELLPQLRDLCRLDLSIDRFRLRKKTWKNPGTVFL
DYHVYEEDINISSNWEVFLEVLDEPERMKSMSQLAVLTRRWSPAQMKLEPFREAVLESSS
VDELKEKLSEISGIPLENVEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDD
GAVVFYRDKSEELMELSDEERNELMKKESSRLLKTGHRVNYSPRKEKALKIYLDGAPNKD
SGQD
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagttttacaaaatttgatgtcaggtttaaagccaaagaagagtttccagtta
atatctccaagccagggtaagttttggagttgcagacagagtatttttgatgagatgaag
aagaaattctctcagatagaaaatgctgcagatgagccacgagtgctgtgcatcattcag
gataccaccagtgcaaagtctgtaaatgagaaactcactttcaacctccctgcttcaacg
cccctgagaaaactttttgaagatgttgcctcgaaagctggctatgtgaatggcactttt
gatttaacatggggaagtggtacagacatggcaccattggaccatagcagtgactcatct
ctggcagagtctgggtttgaaccaggaaagaaaaactttctccatctcacagataaagat
ggtgaacaacctcagatagcatcagatgaatcaggtacagcagacagcagcggtctagat
gacagctcccaggacaggttcattggtcccctgcccagagactgcacagttggctgcagt
agtgattatagcagccccagctattcttactcctccatattaagcaaatctgaaacagga
tatgtgggtttagtgaaccaagccatgacctgttatctaaacagcctgctgcagacactc
ttcatgacgcctgaattccgaaatgctctgtacaactgggagtttgaagagtcagaagag
gaccctgtaaccagtattccttaccagctccaaaggctgtttgtgctgctgcagacgagt
aagaaaagagccattgagacaacggatgtgactcgcagctttggctgggacagcagtgaa
gcctggcagcagcatgatgtacaggagttatgccgtgttatgtttgatgcactggagcag
aaatggaagcagacagagcaggctgacctaatcaatcagctttatcagggcaagctgaag
gattatgtaaggtgtctggagtgtgggtacgagagctggagaattgacacataccttgac
atcccacttgtgatcaggccttatggttcaaaccaggcttttggcagtgtggaagaagcc
cttcaagcatttatccagcccgagactcttgatggccctaatcaatacttctgtgagcgg
tgtaaaaagaaatgtgatgcccgaaagggcctgaggtttctgcattttccatacctcctg
actctgcagttgaagcgctttgactttgactacacaaccatgcaccgaataaagctgaat
gatcgtatgacgttccctgaagagctggatatgagtccatttattgatgtggaagatgag
aaatctcctcagacagaaagctgcactgacagtggggctgagaatgaaggcagctgtcac
agtgatcagatgagtaatgatttctccaatgacgatggagttgatgaaggcatttgtcta
gagaacaccagcagtacagaaagatctttgaagtctaaaagttccttaacgtttgagctc
ttctccgtcatggttcactcaggaagtgcagctggtggccactactacgcctgcatcaag
tccttcagtgatggacagtggtacagttttaatgaccaacatgtcagcaagattactcaa
gatgacattaggaaaacatatggtggaacctcaggaaccagaggttattattctagtgcc
tttgccagttctacaaatgcgtatatgctgatctacagactaaaggatccttcaaggaat
gcaaagtatttggaggttcaagacttccctgcccatataacgcgtctagtgcagaaggag
aaggatctggaggagcaggaaaagaagcaacgtgaaatagaacgcaacacatgcaagatt
aagctgttttgcatgcacccagtgaagatgcttatgatggaaaacagactcgaggttcac
aaggataagacactgaaggaagctgttgaaattgcatacaagctcatggacctggatggg
atagttcccctgaactgctgccgccttgttaaatacgatgaattccatgagtatctggag
aggtcatatgaaggagaggaggatactccaatgggccttctcctgggtggagtgaagtca
tcctacatgtttgacttattactggaaacaaggaggccagaacaagtcttccagccatac
aaaccaggagaggtgatggtgaaagtgcatgttgttgatctgaagactgaggtgatagcc
tctcctgtcagtgtcagagcttacctgaaccagaccgtcacagagttcaaacagctaata
tcacaggcaactgggctctcagctgaaactatgcgcatagtactggagcgttgctataat
gacttaaggctcctctatgtacctaacaagacactgaaagcagaggggttcttcaggagt
aacaaggtttttgtcgaaagctccgattcaacagatcatcaagtcactttcacggattca
cttttatggaagctgcttgaccgccatggaaacactattagactgtttgtttcattgcct
gagcaatctccaggttcccatgcaagcagaactctttgccaaaaaggtggtggagattca
ggccatttggaagacaactttgaaatggtaaagggcaacagaaaatcggtggaggccatt
ttggaggaaagcacagagaaactgaaaaacctgtctctccaacagcagcagggaggaggg
aacggagacagcctcaaaagctcagatgctagtgactttgaacacattgagtcaccctca
caggaggccgactcttcaatgtcagtagacaacagagagctggagaaccggattcagacc
tcggatccagagaacaactttcagtcagaagagcgttccgactcggatataaacaacgat
cgcagtaccagctcggtggacagcgatatcctcagctccagccacagcagtgacacgttg
tgcaatgctgacaatgcccccatccccttagccaatggccttgactctcacagcatcacc
tgcagtcggaggtcaaaagcgaatgagggaaaaaaagagacgtgggacacagcagaggag
gattctgggacagacagcgagtatgatgagaatggcaagaataaaggagagacccagtac
atgtacttcagagcagagccatattctgcagatgaaagctctggagaaagacaaaaatgt
ctgttggtccatgttgataaaagaatcacacttgtggcatttaaacaaaatttggagcca
tttgtgggagttccatcctctcaattcaaggtcttccgggtctatgccaacaaccaggag
tttgagagtgtgcgactcaatgaaacactttcttcattttcagatgataataagataaca
ataaggttaggaagagcactgaaaaagggggagtatcgagttaaagtttaccagcttctg
gtgaatgatccagagccttgcaagtttttagtggatgcagtatttgctaaaggaatgaca
gtccggcagtctaaagaggagcttttgcctcagctcagggatctttgcagactggatctc
agcattgacaggtttcgtctgaggaagaaaacctggaagaatcctggaacagtatttctg
gactatcatgtttatgaggaagacataaacatctctagtaactgggaagtcttccttgaa
gttcttgatgaaccggagaggatgaaatcgatgtctcagctcgcagtgctgacgcggcga
tggagtcctgcgcagatgaagttagagccgttccgggaggcggttctggagagcagcagt
gttgatgaactgaaagaaaaactcagtgaaataagtggaattcctctagaaaatgtagaa
tttgcaaagggcagaggaacatttccatgtgacatctcagtactggagattcatcaggat
ttggattggaatcctaaagtttcaactttgaacgtctggcctctctacatctgtgatgat
ggtgccgttgtcttttacagagacaagtcagaggaactcatggagctatcagatgaagag
agaaatgagctcatgaaaaaggaaagcagccgtctgctgaagacaggtcaccgagtaaac
tactcacctcgcaaagagaaagcactgaagatctatttggatggtgcaccaaataaagac
tcaggccaagactga
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integrated database retrieval system
