Lepisosteus oculatus (spotted gar): 102694972
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Entry
102694972 CDS
T07349
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
loc03016
]
102694972
Enzymes [BR:
loc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
102694972
Transfer RNA biogenesis [BR:
loc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102694972
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
TetR
Motif
Other DBs
NCBI-GeneID:
102694972
NCBI-ProteinID:
XP_006641083
Ensembl:
ENSLOCG00000004035
UniProt:
W5M8W9
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Position
LG22:complement(5425155..5491877)
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AA seq
756 aa
AA seq
DB search
MIMLLWVSHILCDLILVTFAAETEDNWKDGWGYFHSCFMSAWQNRFFVYSVAAVCIAIWF
TFQMVMKKENKGVSSTLAQNPKNKKEKGIVAEKVNKVYVSGVKIFYGSQTGTAKGFAEDL
SIDVQSLGLPSEVIDVKDYDPDDSLAEEATSKSVCVFLFATYTDGKPTENALWFCKWLEE
TSTDFRYGNTYLKGMRYAVFGLGNSVYSSHYNTVCKNVDKWLWMLSASRIMTRGEGDCNV
VKSRHGSIEADFAAWKSRFLTRLQSLAKGEKKSCGKQCKSGRCKNKQKHQQPAEEESESS
PGKEEQSSEEELFETSSEEDFTQDEVATHGPVIDVEDLGQVMNQVKKAKKRGELEEDPGK
VMLSKHSTGRSDDEEAREMITPALRAALTKQGYRLIGSHSGVKLCRWTKSMLRGRGGCYK
HTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPPEKILKEAVENHQNM
IRQFRGVPGVMADRYEEGMMVKHCALSLVGEPIMYPEINRFLKLLHHHRISSFLVTNAQF
PEEIRSLEPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFQDSLKALGEKQQRTVYRLTL
VKAWNVDELKAYAELVALGKPDFIEVKGVTYCGESSASNLTMANVPWHEEVTHFVQQLAD
QLPDYEIASEHEHSNCLLLAHIKFKVAGEWWTWIDYERFQELVGELEESGGANTFTALDY
VAKTPRWAVFGAKERGFDPADTRFQRKNKTKDLSGC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgattatgttgctttgggtttctcacatcttgtgtgatctgattttagtcacgtttgct
gccgaaactgaggacaactggaaggatggatggggctattttcactcctgtttcatgtca
gcatggcagaacagattctttgtgtactctgtggcagctgtctgcattgctatctggttt
acttttcagatggttatgaagaaagagaataaaggcgtaagtagcaccctggctcagaac
cccaagaataaaaaagagaaagggattgtggctgaaaaggtcaacaaagtttatgtctca
ggggtgaagatattctatggttctcagactggaacagcaaagggctttgctgaagatctt
tctatagatgtgcagtccctaggcctgccttcagaagtgattgatgtgaaagattatgat
ccagatgacagtttggcagaagaggctacaagcaagtcagtttgtgtgtttctgttcgct
acttacactgacggtaaacccacagaaaatgccctttggttttgtaagtggctggaggag
acatccacggatttcagatatgggaatacctatctcaaaggcatgagatatgcagtcttc
ggtctggggaactctgtgtattccagccactacaatacggtgtgcaagaacgtggacaag
tggctgtggatgctaagtgcttcgcgcatcatgacccgcggggagggcgactgcaatgtg
gtcaagagcaggcatggcagcatagaggccgactttgctgcctggaagtccaggttcctg
acccgcctgcagagccttgctaagggggagaagaagtcctgcggcaagcagtgcaaatcg
gggagatgcaagaacaagcagaagcaccagcagcccgcggaggaggaatcggagtcctcc
cctggcaaagaggagcaaagctcggaggaggaattgtttgagaccagcagcgaggaagac
ttcacccaagatgaagtcgccactcatggacctgtaattgacgtggaggatctgggccaa
gtcatgaatcaagtgaagaaagccaagaaaaggggggagttggaggaggatcctggaaag
gtcatgctgtccaagcatagcactgggaggagtgacgacgaggaggcgagagagatgatc
actccagctttgagagctgctctgacaaagcaagggtacagactaatagggagtcattct
ggagtgaagctctgtcgatggactaagtcaatgctgagaggcagaggaggctgttataag
cacacattctacggcattgagtcccatcgctgcatggaaaccactcctagcttagcttgt
gccaacaaatgtgtcttttgttggagacatcacactaaccctgtgggcactgaatggcgc
tggaagatggaccccccagagaagatcttgaaggaagctgtggagaaccaccagaacatg
atcagacaattcagaggagttccaggcgtgatggcagaccgctatgaggaagggatgatg
gtgaagcactgtgctctgtccctggtgggagagcccatcatgtaccctgagatcaacagg
ttcctgaagctgcttcaccaccacaggatttccagcttcctggtgacaaacgcacagttc
ccagaggagatcaggagccttgagcctgtaacacagctgtatgtcagcgtggacgctagc
accaaagacagcctgaaaaagatcgaccgcccactcttcaaggatttctggcagcgtttc
caagacagtttgaaagcactgggagagaagcaacaacgcacagtgtacagacttacactg
gtgaaagcctggaatgtggatgagctcaaggcctacgcagagctggtagctctgggaaaa
cctgacttcatagaggtgaagggagtgacgtactgtggagagagctctgccagcaacctg
accatggctaatgttccctggcacgaggaggtcacccacttcgtgcagcagctggcagac
cagcttcccgattacgagatcgcctcagagcacgagcactccaactgcctcctcctcgca
cacatcaagtttaaagttgctggggagtggtggacctggatcgactacgagagattccag
gagctcgtcggggagttggaagagagtgggggcgcaaacaccttcacagctttggactac
gtggcaaagactcccagatgggccgtgttcggggccaaggagagagggtttgatcctgca
gacacccgcttccaaagaaaaaacaaaactaaggatctttccggatgctga
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