Lepisosteus oculatus (spotted gar): 102695079
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Entry
102695079 CDS
T07349
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102695079 (trim16)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102695079 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_10
DUF4407
DUF6468
AAA_13
BshC
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
102695079
NCBI-ProteinID:
XP_006635502
Ensembl:
ENSLOCG00000013122
UniProt:
W5N6A5
LinkDB
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Position
LG10:38029353..38039582
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AA seq
627 aa
AA seq
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MPDTETAKPPDRPACPICSGGFEDPVTFKCGHCFCRGCLGETWDKAESKDVTSCPQCQDT
SQFRSPPGENGLMNGTGEHQAETAEESNGEKTPEEEMQEPGEGEGKEKAEEVERVEEEET
LAALGPDDVVCDSCIETHSRAVKSCLTCMVSYCESHLRPHLENVKFQNHRLVEPLRDIES
RTCETHRQSLDVFCLADNSCLCQGCMEEGHRGHNTVPVGDARKQIEEEMQKKCAEMIKTL
TAAENAISKLETNTKSIENSVKDVKATIEEQFSALVEAVEKAKKEVKEFLVNEKSSAVKQ
AEGIKAHLEQKCTELKKTQVQVEKLSKKKNDIDFLQDYCEWKQGAPDVTLPGVYIGLMDR
LPSFSRVVIESTKEICGQLLSTYRDNLKEVCKNDKCSIKTTVHAIIPLKHHISMPEPQTR
SDFLKYTSPMTFDPDTAHRFLRLTEDNRKVTNTTPWQHPYMDVPERFEHWRQVLASESFY
LGRHYFEADISGEGTHVGVTYKSIDRKGQENNSCITGNDFSWCLQWNAKQFSAWHSDVET
PLKVEKFTRIGVYVDYSRGVLGFYGVADTMTLIHKYKAKFQEPLYPAFWLSKKENTVQLV
GPGDAPPQKTPSAPPTLPTIPTLSAPK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacactgaaacagcaaagcctccggaccggcctgcctgccccatatgttctggg
ggttttgaagaccctgtaacctttaaatgtggccactgcttctgcaggggttgcctgggt
gagacatgggacaaagcggagagcaaggatgtcaccagctgtccacagtgccaggacacg
tctcagttcagatctccccctggggagaatggtctgatgaatgggacaggggaacaccag
gcagagacagcggaagagtccaatggtgaaaaaactccggaggaggagatgcaagagccc
ggagaaggagaaggaaaagagaaagcggaggaggtggagagagtggaggaggaggagacc
ctggcggccctgggccccgatgatgtggtgtgtgactcctgcatcgagacccactccagg
gctgtgaagtcctgcctcacctgcatggtctcctactgcgagagccacctccggcctcac
ctggagaacgtcaagttccagaaccaccggctggtggagccgctgagggacatcgagagc
cggacctgcgagacccaccggcagtccctggacgtcttctgcctggcagacaactcctgc
ctctgccagggctgcatggaggaagggcaccgagggcacaatactgtgccagtaggggat
gcaagaaagcagattgaggaagaaatgcagaagaaatgtgcagaaatgattaaaactctt
acagctgctgagaatgccattagcaagctagagaccaacaccaaatccatcgagaattct
gtgaaagatgtcaaggccaccattgaggagcagttttcagccctggttgaggcagtggag
aaggccaagaaggaggtgaaggagttcctggtgaacgagaagagctcagctgtcaaacag
gcagagggaatcaaggcccacctggagcagaagtgcaccgaactgaagaaaacacaggtg
caagtggagaagctgtccaagaaaaagaatgatattgatttcctccaggattactgtgaa
tggaaacagggggcacccgatgttaccctacctggcgtttacattggcctcatggaccgt
ctacccagctttagtagagttgtgattgagtccacaaaggagatctgtggccagctcctg
tccacttacagggacaatctcaaggaggtctgcaagaatgataaatgcagcataaaaacc
acagttcatgcaataatcccacttaagcatcatatttcaatgccagagccacagactcgg
agtgacttccttaaatatacttcccccatgaccttcgacccagacacagcacacaggttc
ctacgtctcacagaagacaacaggaaggtgaccaacaccacaccctggcagcacccctac
atggacgtccccgagcgattcgagcactggcgtcaagtgctggcgtccgagagcttctac
ctgggtaggcactattttgaggctgacatcagcggagagggaacccacgtgggggtcacc
tacaagagcatcgaccgtaaaggccaggagaacaacagctgtatcacgggcaacgacttc
tcctggtgcctgcagtggaacgccaagcagttctcagcctggcacagcgacgtggagacg
ccgctcaaggtggagaagttcacacggatcggggtctacgtcgactactccaggggcgtt
ctgggtttctacggagtcgcggacactatgactcttatccacaagtacaaggccaagttt
caagagcccctttaccctgccttctggctgtctaagaaggagaacacggttcagctggtt
gggcctggagacgcacctcctcagaagaccccttcagcccctcccacacttcccacaatt
cccacactttcagcgcccaagtaa
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