Lepisosteus oculatus (spotted gar): 102695170
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Entry
102695170 CDS
T07349
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03250
Viral life cycle - HIV-1
loc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102695170 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102695170 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102695170 (samhd1)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102695170 (samhd1)
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Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
102695170
NCBI-ProteinID:
XP_015220264
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Position
LG18:9075958..9088161
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AA seq
567 aa
AA seq
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MSRLENRKRLREEILPTDLCVTPEKKVSDVSWRHTDYQDWGVEETCKYLQLKGFGEWQQK
FRDHQITGVGLPYITDAHLERMGIGPLGARLQILHCLRNLWQFSVDRMKVFNDPIHGHIE
MHPLLVKIIDTPQFQRLRFIKQLGGTYLVFPGASHNRFEHSIGVGYLAGRLVQALYERQP
ELRITQRDMLCVQIAGLCHDLGHGPFSHMFDGIFIPLARPGLNWKHETASLQMFDHLVSA
NHLETAMEQYGLVLPDDIIFIKEQIAGPTYQNQSSWPYRGRSEEKGFLYEIVANKRNGID
VDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVENKKHICTRDKEVGNLYDMFHTRNCL
HRRAYQHKVGNIIETMITEAFLKADKYIQIEGSEGRTFTISTAIDDMEAYTKLTDHIFLQ
ILYSTAPELKEARTILNNVMCRKLYKCIGQTQPKPDTKILPHELDTLASDVAKSIPQVPS
DVNLDPGDFIVSVINIDYGMKEKNPINNVRFYCKNDPTNAIRIRKDQVSPFLCKHSNSCY
CKSEFSGLTYIFCPKTFIGPKHCAYSA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagccggctcgaaaatcgaaagcgtttgagagaagagatcttgcctaccgacttgtgc
gtaactcccgaaaagaaggtttcggacgtttcgtggcgacacactgattatcaggactgg
ggtgttgaagaaacgtgcaaatatctgcaactgaaagggtttggagaatggcaacaaaaa
tttagagatcaccagattacaggtgtgggcctgccctacattactgatgctcacctggag
agaatggggattggacctctgggtgcccgattacagattcttcactgtctgagaaatcta
tggcagttttctgttgacaggatgaaggtcttcaacgaccccatccatggtcacattgag
atgcaccccttgctggtgaaaatcatcgacaccccccagtttcagaggctgcgcttcatc
aagcagctgggtggtacctacttagtgtttcctggagcttcccacaaccggtttgagcac
tccatcggggtgggctacctggcgggccggctggtccaggccctgtatgagcgacagccg
gagctgcggatcacccagagggacatgctgtgtgtgcagatcgcagggctgtgtcacgac
ctgggacacggccctttctctcacatgtttgatggaatattcatccctctagcccgccca
ggcttaaattggaagcatgagactgcctctcttcagatgttcgatcacctggtatctgcc
aatcatctggagactgcaatggagcagtatggcctagttcttccggatgacatcattttc
atcaaggagcagatagctgggcccacttaccagaaccagtcttcatggccttatcggggc
cgttcagaagagaagggcttcctgtatgagattgtggccaacaagagaaatggcattgat
gtggacaagtgggattattttgccagggattgccatcaccttggaattcaaaacaacttt
gactacaagcgctttctgaagttcgcccgagtttgtgaggttgagaataagaaacacatc
tgtaccagagacaaggaagtagggaatctgtatgacatgtttcatactagaaactgcctt
caccgcagagcctaccagcacaaggttggcaatatcattgagacaatgataaccgaggct
ttcctgaaggcggataaatacatccagattgaaggctccgaaggaaggacattcacaatt
tccactgcaatagatgatatggaggcctacaccaagctgacagatcacatcttcctgcag
atcctgtattccaccgccccggagctgaaagaggctcggacaatcctcaacaacgtgatg
tgccggaagctgtataagtgcatcggacagacgcagccaaaaccggacacaaagatcttg
ccgcatgagctggacactttggccagcgatgttgcaaaatctatcccacaggtcccatca
gatgtgaatctagatccaggagacttcattgtcagtgtgataaacatagactatggaatg
aaggaaaaaaatcccatcaacaacgtgcgtttctactgcaagaatgaccctaccaatgcc
atcagaattcgtaaagaccaggtaagcccctttctatgtaaacatagtaacagttgttat
tgcaagtcagaattctctggccttacctatatcttctgtcctaaaactttcataggcccc
aagcactgtgcctacagtgcctaa
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