Lepisosteus oculatus (spotted gar): 102695247
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Entry
102695247 CDS
T07349
Symbol
trerf1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102695247 (trerf1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102695247 (trerf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
TFIIS_C
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
102695247
NCBI-ProteinID:
XP_006626481
Ensembl:
ENSLOCG00000017240
UniProt:
W5NL14
LinkDB
All DBs
Position
LG1:complement(64945687..65043319)
Genome browser
AA seq
1219 aa
AA seq
DB search
MEDQSVYKTNHNVNCTDSSYFQHQQQSSMASMNHSYGATAMEPLQSSPVSPQFPHDSRDG
SAVSVKGFPGMVEVSKAAGSWPGSANHHRNSMGGAPAMWGSPTQGEPPDIGDGSNGGGYQ
YNTTAQTSTDGQPKVTSSVLQKLDSFTQVFANQNLRIHQGNAGNGSANSMAQHRQVGVSP
LASTTTDSTLRQLLSHKPPGQESQQVTLPQQQQPQPSQQRYQLEQQQVQRSFDQAQPKQQ
HVQELQQQHQQQQQLFFEYQQQQLQQQQQQQRVAHLQIQQALQQRQQIQSLQSQQQQLMQ
QQQQVQQQNQFYLQPQAQQQTQLTAHALVLQQLQQQQQHQRSTYYHQHSHPAMHQAQQQM
QPPAAIPLYNQNRKAMQQQQQQQHHSYSQPEQVHSIQNLQLSSGTQYYFQEQQDQYRQLY
QPNLQMQQQVQSQEDMGLQSPPKQYLPEPGCHLLSTSQHTPGDPSPAVQGVPNTRADSLV
CQEPHPPMVMSCAPHQQNQRQVREAIPTIQLVNSKGGAHRQLHSPTAMWTQGSLSNVKVE
TASPDHSALTNTPLLEREDTKIKLLCSICQKEFKSLPALNGHMRSHGGMRALPGPKQEEG
DTQLPKEVEPLLPIIMPVSVPVKLPLAAPTPDLSPTPCRPPDSEAATLVSPTSEPPQALQ
QQQQCLLPGSGAAHPSPVPSDPIRRAQKAEKMAGSGVRGGQQDKKKYRHRPEPLIIPSPC
GGLSGGGATLFQSQLRSPRILGDPPPYTPPPMLSPVRQGSGLFSSVNSGYLHAGGQPTPI
TPRLLLCRASSVDSSAVAVTPGSGEQPVDVKPRINIGPRFQAVIPELRRHSRVERDLHKA
SLVWTPEPDLDSPGAQQKVDNLVKMACSSVLPGGGTNSEYALHCLFESRGNIMATLEKLL
MLRPLRPKSHPLADYHYAGSDKWSVLEKKQLNKALAVHNKDFFYVQKMVKTKTVAQCVEY
YYTWKKRLRLGKKNRSRLTNQESEDMASGEDGELESEELEEEKKSSREQEPEVPQSPDQE
IQLDELAEADQMSALPNATFVCEVPNCGSMFNSRQALNGHARIHSNTNQAHRPAPGGKPK
SMSQSGHGSVKSSPAHSTTSGDTDPTLIFPCKECGKVFFKIKSRNAHMKTHRQQEDPDRR
KPQRASLGLDLEPPHRGAKACLPMGPTPLPFDHMSMVKRLGAEEEEEEEEEDAGEALISP
HLLLMGEPGEYLPEQQDEL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagtctgtctacaagacaaaccacaatgttaattgcactgacagcagctat
ttccagcatcagcagcagagctccatggcctcaatgaaccatagttatggggcaactgcc
atggaaccactgcagtcttccccggtctctccccagttccctcacgactcccgagatggt
tctgccgtgtctgtaaagggttttccaggaatggtggaggtttccaaagctgccggctcc
tggcccggatctgccaatcatcatcgaaacagtatggggggtgcccctgccatgtggggc
tcgcccacacaaggggagcctccagacattggagacggcagtaatggcggtgggtaccag
tacaacaccacagcacagacaagcaccgatgggcagccaaaagtcaccagcagcgtcttg
cagaagttggattcatttacccaggtctttgccaaccaaaacctgcggattcaccaaggc
aatgccggtaacggaagtgccaacagcatggctcagcacaggcaagtgggcgtctcccct
ctagccagcaccaccacggacagcacccttcgccagctgctttcccataaaccccctggt
caggagtcccagcaggtgaccttgccacaacagcagcagccgcagccttcccagcagcga
taccaactggagcagcagcaagtacagaggagcttcgaccaggcacagcccaaacagcag
cacgtccaggagctccagcagcaacaccaacagcagcagcagctctttttcgagtaccag
cagcagcaattacagcaacaacagcaacagcaaagagtggctcatctgcagattcagcaa
gccctgcagcagcgtcagcagatacagagcctgcagtcccagcagcagcagctaatgcag
caacagcagcaagtgcagcagcaaaaccagttctacctgcagccacaagcacagcaacag
acgcagctcacggcgcacgcgcttgtcctgcagcagctgcagcagcagcaacagcaccag
cgcagcacttattaccaccagcactctcatccagccatgcatcaggcgcagcagcaaatg
caacctcctgctgccatacccctgtataatcagaaccggaaagccatgcagcagcagcag
cagcagcagcaccactcctattcccagccagagcaggttcattccatccagaacctccag
ctctcctccgggacccagtactatttccaagagcagcaggaccagtacagacagctctac
cagcccaatctccagatgcagcagcaggtccagtcacaggaggatatgggcctccagtca
ccaccaaaacagtatcttcccgaaccgggctgccacctcctgagcacaagccagcacact
cctggggaccctagccctgcagtccaaggggtccccaacacgagggcagacagtctggtg
tgccaagagccccatccccccatggtcatgtcctgcgccccccaccagcagaatcagagg
caagttcgcgaagccatcccaaccatccagctggtgaacagcaaaggaggggcccatcgg
cagctccactctcccactgccatgtggacacaggggtcattgtcaaacgtcaaggtagag
actgcatccccagatcacagtgccctgactaacactcctctgctggagagggaagacaca
aaaatcaagctcctgtgttcaatctgccagaaggagtttaaaagtctcccggcgctcaat
ggacatatgcgctcccatggtggaatgagggcactacctggtccaaaacaggaagaaggg
gacacccagctgcccaaagaggtggagcccctgcttcccatcatcatgcctgtctctgtg
cctgtaaagcttcccctggcagcgccaaccccagacctctctcccactccctgccgcccc
cctgacagcgaagccgccactctcgtcagcccgaccagcgaacctccacaggccctgcag
cagcagcagcagtgtctactgcccggctctggagcggcccatcccagccccgtgccctct
gacccaatccgccgtgcccagaaggcagagaagatggcaggcagcggggtgaggggaggg
cagcaggacaagaagaagtaccgccaccgtcccgagcccctcatcatcccttcgccctgt
gggggcctgtccggcgggggcgccacactcttccagagccagctgcgctccccgagaatc
ctgggggatccccccccgtacacgccccctcccatgctgagtccggtccgccaaggctcg
gggctcttcagcagcgtaaacagcgggtacctgcacgcaggtgggcagccaacacccata
accccccggttgctgctctgcagagccagtagtgtggacagcagtgcagtggcagtgacc
ccaggttcaggagagcagcctgtggatgtgaagccacggatcaacattggcccgcggttc
caggctgtgattcctgagctgaggagacattccagggtggagcgagacctgcacaaagcc
agcctggtgtggacccccgagccagacctggactctccgggcgctcagcagaaagtggac
aatctggttaaaatggcctgttccagtgtgctgcctggagggggaaccaactctgaatat
gcgttgcactgtttgtttgagagcagaggaaacatcatggctacactggaaaaactgctc
atgctgagacctttgagaccaaaatcccatcctcttgctgattaccattatgccggatct
gataaatggtcagttctggagaagaagcaactgaacaaagccttagctgtgcacaacaag
gatttcttttatgtacagaaaatggtgaagactaaaacagtggcacagtgtgttgaatac
tattacacctggaagaaaagactgcgactgggcaagaagaacagatcccgcctgactaac
caggagagtgaagacatggcaagcggagaagatggagagctggagtcggaagagttggag
gaggaaaagaagtccagcagagagcaagagcctgaagtaccacagtctcctgaccaggaa
atccaacttgatgaactggcagaagctgatcaaatgtctgctttgcccaatgcaaccttt
gtttgtgaggtacctaactgtggatctatgttcaattctagacaggctctgaatggccat
gcacggatccacagcaacacaaaccaggcccacaggcctgcgcctggtggcaaaccgaaa
tcgatgtctcagtcaggtcacggctcggtcaagagctccccagctcacagcaccactagc
ggagacaccgatcccactctcatcttcccctgtaaggagtgtggaaaggtgtttttcaaa
atcaaaagccgcaatgcccacatgaagacccaccggcagcaggaggaccctgaccgcagg
aagccccagcgggcgtccctggggctcgacttggagccaccccaccgtggggccaaagcc
tgcctgcccatgggccccaccccgctgcccttcgaccacatgagcatggtgaagcggctg
ggggcagaggaggaggaggaggaggaagaggaggacgcgggggaggccctgatcagccct
cacctgctgctgatgggggagccgggggagtatctgcccgagcagcaggacgagctgtga
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integrated database retrieval system
