Lepisosteus oculatus (spotted gar): 102697828
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Entry
102697828 CDS
T07349
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102697828 (smarcal1)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102697828 (smarcal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
102697828
NCBI-ProteinID:
XP_006636786
Ensembl:
ENSLOCG00000009637
LinkDB
All DBs
Position
LG12:complement(23384128..23412884)
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AA seq
853 aa
AA seq
DB search
MTPAMSDCLTDEQQRRIEENRQRALARRAERLAQSQQKHYGPPTGQSDPCVPAQSKGPAI
GSGANPPKLLKQTASLPQTNVGGHSALQGTEEKASRETLQAPWASQIKGNGISKLNALNK
MDSKEESSTALNSIETKTEMAAQEAAGSGTQATKFYGTGVKLKEIVLSSEQISATIKDNA
STMATKKPACLVKGKCVAHTSERFRVEVSYNADLIMVFKSMSSRNYDPATKMWNFNLEDY
TNLMEEVNKLPFVALTPLEGMENVDVKAAVGKSRDAAALGALLKLCSNWQKPGATTRGHC
VLVSRTRFEVEVGYQVDVIAAFKQIRSKSYDMKTRKWNFLLEDYKELMETLSRIPAVEVE
PLPRAVLQTFSPQFERSVSSLPEIPEADLSSVDSSLTRSLMPFQREGVNFAISREGRLLL
ADDMGLGKTVQAICIAAYYKKEWPLLIVAPSSVRFTWAEAFRRWLPSVNADRINVIVKGK
DSLSSGLINIISYDLLSKMDKQLPATSFRILIIDESHFLKNMKTARCKAALPLLKVAKRV
ILLSGTPAMSRPAELYTQILAVRPSFFPRFHEFGARYCDAKQLPWGWDYSGSSNLGELRL
LLEESVMLRRLKSDVLSQLPAKQRKVVTVTTDGIAARAKAALAAAAKEMAKGHRNKQQEK
EALLIFYNRTAEAKIRAIVEYVIDLLESGREKFLVFAHHKLVLDSLTKELGDKGISYIRI
DGSTSSADRQSLCQHFQYSTKSCVAVLSITAANMGLTLSSADLVVFAELFWNPGVLIQAE
DRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQGKMNVLEQAGLSEANLSENAESASFCCK
HDIQQFSQVCEEC
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgcaatgtcagactgtctgacagacgagcagcagaggaggatagaggagaat
cgacagcgagctctggcaaggagagctgagagactagcccagtcacaacagaagcactat
ggccctccaactggacagagtgacccttgtgtccctgcacaatccaaaggtccagctata
gggtcaggtgctaacccaccaaagctactgaaacagactgccagtctcccacagactaat
gtgggaggccacagtgcactgcaaggaacagaggaaaaggcaagcagagagacactacaa
gcaccttgggcttcccaaataaaaggtaatggcatctcaaagttaaatgctctcaacaaa
atggactccaaggaggagtcctctacagcccttaattccattgaaacgaagactgagatg
gcagcacaggaagcagctggctcaggcacacaagcgaccaagttttatgggacaggggtg
aaactgaaagaaattgtcctcagctctgagcaaatttctgctaccattaaagacaatgca
agcactatggctacaaagaaacctgcctgtctggtgaaaggaaagtgtgttgcacacaca
tctgagcgatttcgagtagaagtgagctataatgcagacctcatcatggtgttcaagagc
atgtcctccaggaattatgatccagcaacaaagatgtggaattttaacctggaagactac
actaatttgatggaggaggtgaacaagcttccctttgtggcgctaacacccctcgaagga
atggaaaatgtggatgtcaaggcagcagtgggcaagtcaagagatgctgctgccctgggc
gccctcctgaagttatgcagcaactggcagaagcctggtgccacaactcggggccattgt
gtgctggtgtcgcgcactcgctttgaggtggaggtaggctaccaggtggatgtcattgct
gccttcaagcagattcgttccaaaagctacgacatgaagaccagaaagtggaattttctc
ttggaggattacaaggagctaatggaaaccctgtccagaattccagctgtggaagtggag
ccactgcctcgcgctgtgctgcagaccttcagcccccagtttgagcggagtgtttccagc
ttaccagagattcctgaggcggacttgtcttctgtcgactctagcctgacacgtagcctc
atgcccttccagagagagggggtcaactttgcaatatcaagggaaggccgcctgctcctg
gctgacgacatgggcttggggaagactgtacaggctatttgtatagcagcatactacaag
aaggagtggcccctgctgatagtggccccctcgtctgtgcgtttcacctgggcagaggcg
tttcggagatggctgccctctgtgaacgcagaccgcatcaacgtcatagtgaaaggcaaa
gacagcctgagctccggactcattaacatcatcagctatgacctcctcagcaaaatggat
aagcagctgccagcgacctccttccgcatcctcataatagatgaatcccattttctcaaa
aacatgaagactgctcgctgcaaagctgctctgcctctccttaaggttgccaaaagggtg
atccttctctcaggcactccagccatgtccagaccagcagaactctacacgcagatcctg
gctgtgcgaccctccttctttccacggttccatgagtttggggcacgctattgtgatgcc
aaacagcttccctggggctgggattactcgggctcctctaacctgggcgagctgaggctc
ctgctggaagagtcagtgatgctgcgccgcctcaaatccgacgtgctctctcagctcccc
gccaagcagcgcaaggtggtaactgtgaccaccgacgggatcgctgcccgggccaaggct
gcgctggcggctgccgccaaggagatggccaaagggcacagaaataagcagcaagagaag
gaagctctattgatcttctacaatcgtactgcagaggcaaaaatccgggccattgtggag
tatgttatagatctactggaaagcggccgagagaagttcctggtttttgcacaccataag
cttgttcttgacagcttaacgaaagaactgggagataaggggatcagctatatcagaatt
gatggctctacatcctcagcagatagacagagcctctgtcaacacttccagtactctaca
aagagctgtgtggcagtgctctccattactgctgccaacatgggactgacactttcatct
gctgatctggtggtctttgctgagcttttttggaacccaggggtcctgatccaggcagaa
gatcgagtccaccgtatcggacagaccagcagcgttaacattcactacttggtggccaaa
gggactgcggatgactacctctggcccatgatccaagggaagatgaatgtcttggagcag
gctggtctatcagaagccaacctttctgagaatgctgagtctgccagtttctgctgcaag
catgacattcagcagttcagtcaagtctgtgaggaatgctaa
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