Limosilactobacillus oris: AYI71_05250
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Entry
AYI71_05250 CDS
T04391
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lor
Limosilactobacillus oris
Pathway
lor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYI71_05250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lor03021
]
AYI71_05250
03400 DNA repair and recombination proteins [BR:
lor03400
]
AYI71_05250
Transcription machinery [BR:
lor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYI71_05250
DNA repair and recombination proteins [BR:
lor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYI71_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AMS08244
LinkDB
All DBs
Position
complement(1076325..1076894)
Genome browser
AA seq
189 aa
AA seq
DB search
MCTNLELKVFDGQDKSELSMVEVAHAILAHHGEAMAFVDLTNEIQQYLGKSDEEIRERLA
QFYTDLNVDGSFISLGDNTWGLRAWYPFESIDEATVGETEDEEDRPKKKRRKVNAFLADS
DDDDDVIDYDNDDPEDEDLDDRDEDDSSDDDYDEENDDFSDDDDDLDDNIEDQLSELHDE
DEDEEDDDE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaatttggaattaaaggtttttgacggccaagacaaatcagagctttcaatg
gttgaggtggcgcacgctattttagctcatcatggtgaggcgatggcgttcgttgacctg
actaacgaaattcaacagtacctgggcaagagtgatgaggaaatccgggaacgcctcgct
caattctacactgatttgaatgtcgatggcagttttatttcccttggtgacaatacctgg
ggcctgcgggcttggtacccattcgaatctatcgacgaagcaacggttggtgaaaccgag
gatgaagaagaccggccgaagaagaagcggcggaaggttaacgccttcttggccgattct
gatgatgacgacgatgtgatcgattacgacaacgatgatccagaagatgaagacttggat
gatcgtgacgaagacgatagcagcgacgatgattacgacgaagaaaatgacgacttcagt
gatgatgacgatgacctcgatgacaatatcgaagaccagctgtctgaattacatgatgaa
gacgaggacgaagaagacgacgatgaataa
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